Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88631 | Canola | nucleus | 97.9 | 98.79 |
| Bra006811.1-P | Field mustard | nucleus | 97.6 | 98.49 |
| AT5G57620.1 | Thale cress | nucleus | 91.02 | 91.29 |
| CDY25898 | Canola | nucleus | 86.23 | 88.89 |
| Zm00001d018319_P001 | Maize | nucleus | 23.05 | 85.56 |
| CDY08749 | Canola | nucleus | 12.57 | 82.35 |
| KRH18986 | Soybean | nucleus | 54.79 | 50.55 |
| KRH02902 | Soybean | nucleus | 54.79 | 50.14 |
| GSMUA_Achr9P13610_001 | Banana | nucleus | 41.62 | 44.84 |
| GSMUA_Achr5P22760_001 | Banana | nucleus | 42.22 | 44.62 |
| VIT_11s0052g01490.t01 | Wine grape | nucleus | 46.71 | 42.74 |
| GSMUA_Achr8P24780_001 | Banana | nucleus | 39.22 | 42.67 |
| Os08t0248700-01 | Rice | nucleus | 39.22 | 41.46 |
| TraesCS1D01G252300.1 | Wheat | nucleus | 24.85 | 40.89 |
| TraesCS1B01G265400.1 | Wheat | nucleus | 38.92 | 40.88 |
| HORVU1Hr1G061220.1 | Barley | nucleus | 38.62 | 40.69 |
| TraesCS1A01G252600.1 | Wheat | nucleus | 38.62 | 40.19 |
| PGSC0003DMT400009926 | Potato | nucleus | 35.93 | 40.0 |
| Solyc09g008250.2.1 | Tomato | nucleus | 35.33 | 39.86 |
| PGSC0003DMT400005085 | Potato | nucleus | 35.63 | 39.67 |
| GSMUA_Achr7P19530_001 | Banana | nucleus | 40.42 | 39.59 |
| CDX75005 | Canola | nucleus | 34.13 | 39.58 |
| EES14801 | Sorghum | nucleus | 37.72 | 39.38 |
| CDX69328 | Canola | nucleus | 35.93 | 39.34 |
| CDY08162 | Canola | nucleus | 35.33 | 39.33 |
| CDY33205 | Canola | nucleus | 33.83 | 39.24 |
| CDY46743 | Canola | nucleus | 33.53 | 38.75 |
| CDY65680 | Canola | nucleus | 34.73 | 38.67 |
| CDX79698 | Canola | nucleus | 33.23 | 38.41 |
| CDY60980 | Canola | nucleus | 35.63 | 37.9 |
| CDY18676 | Canola | nucleus | 35.33 | 37.58 |
| HORVU5Hr1G063410.1 | Barley | nucleus | 33.83 | 37.54 |
| TraesCS5B01G216900.1 | Wheat | nucleus | 34.13 | 37.13 |
| Zm00001d050185_P002 | Maize | nucleus | 37.13 | 37.13 |
| TraesCS6B01G377400.1 | Wheat | nucleus | 40.42 | 37.09 |
| HORVU6Hr1G083250.1 | Barley | nucleus | 40.12 | 36.91 |
| TraesCS5A01G217900.1 | Wheat | nucleus | 34.13 | 36.89 |
| TraesCS6A01G344700.1 | Wheat | nucleus | 40.12 | 36.71 |
| TraesCS6D01G327300.1 | Wheat | nucleus | 40.12 | 36.71 |
| TraesCS5D01G225800.1 | Wheat | nucleus | 34.43 | 36.39 |
| CDY64987 | Canola | nucleus | 24.85 | 34.73 |
| CDY45629 | Canola | nucleus | 37.43 | 33.97 |
| CDY52538 | Canola | nucleus | 37.43 | 33.88 |
| CDY09184 | Canola | nucleus | 33.23 | 33.74 |
| CDY08748 | Canola | nucleus | 37.13 | 33.7 |
| CDY37840 | Canola | nucleus | 37.43 | 33.69 |
| CDY50326 | Canola | nucleus | 33.53 | 33.53 |
| Zm00001d052069_P001 | Maize | nucleus | 39.22 | 33.08 |
| Zm00001d005784_P001 | Maize | nucleus | 34.13 | 32.95 |
| CDY26977 | Canola | nucleus | 33.53 | 32.94 |
| EES05913 | Sorghum | nucleus | 39.52 | 32.75 |
| EER98942 | Sorghum | nucleus | 35.63 | 32.25 |
| Zm00001d020569_P001 | Maize | nucleus | 34.73 | 31.44 |
| Os02t0786400-00 | Rice | extracellular | 38.92 | 29.82 |
| Os09t0431300-00 | Rice | nucleus | 36.23 | 27.19 |
| CDY17391 | Canola | nucleus | 26.05 | 27.19 |
| CDY57424 | Canola | nucleus | 25.75 | 26.88 |
| CDX86430 | Canola | nucleus | 25.45 | 26.32 |
| CDX85201 | Canola | endoplasmic reticulum, vacuole | 25.15 | 12.84 |
| CDY40299 | Canola | nucleus | 3.89 | 6.5 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078FBT4 | UniProt:A0A078FBT4 | EnsemblPlants:CDY11860 | ProteinID:CDY11860 |
| ProteinID:CDY11860.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00060690001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF928 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EB47F8 | SEG:seg |
Description
BnaC03g12860DBnaC03g12860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FBT4]
Coordinates
chrLK032015:-:98893..100489
Molecular Weight (calculated)
37764.2 Da
IEP (calculated)
6.949
GRAVY (calculated)
-0.769
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDSIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI ADSNENNISS NNNKSPQNLS NSALERLQLH MQLQNLQSPF SSFYNNPMLW PKLHPLLQST PTTPDQNSKL
201: GSQESFHPLG VNVVHQNNNI KLAEINDGVS PLYSENVEQS LNPTHGFQPN FGFSQDLQLD DHNMDLMNRG GSKELFQVGN EFELTNGSNW WSEEVELERK
301: TTSSSSWGSA SVLDQTTDGV VMLQDYGQMS YHSV
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI ADSNENNISS NNNKSPQNLS NSALERLQLH MQLQNLQSPF SSFYNNPMLW PKLHPLLQST PTTPDQNSKL
201: GSQESFHPLG VNVVHQNNNI KLAEINDGVS PLYSENVEQS LNPTHGFQPN FGFSQDLQLD DHNMDLMNRG GSKELFQVGN EFELTNGSNW WSEEVELERK
301: TTSSSSWGSA SVLDQTTDGV VMLQDYGQMS YHSV
001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
Arabidopsis Description
MYB36Transcription factor MYB36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.