Factsheet for HORVU1Hr1G061220.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G265400.1	Wheat	nucleus	93.06	92.77
TraesCS1D01G252300.1	Wheat	nucleus	58.99	92.12
TraesCS1A01G252600.1	Wheat	nucleus	91.17	90.03
Os08t0248700-01	Rice	nucleus	70.66	70.89
EES14801	Sorghum	nucleus	68.14	67.5
Zm00001d050185_P002	Maize	nucleus	65.3	61.98
HORVU5Hr1G063410.1	Barley	nucleus	41.01	43.19
HORVU4Hr1G055640.1	Barley	cytosol	5.68	41.86
VIT_11s0052g01490.t01	Wine grape	nucleus	47.32	41.1
HORVU3Hr1G068550.1	Barley	nucleus	27.76	40.37
CDY25898	Canola	nucleus	40.69	39.81
HORVU7Hr1G096190.1	Barley	nucleus	32.49	39.62
GSMUA_Achr7P19530_001	Banana	nucleus	42.59	39.59
Bra020428.1-P	Field mustard	nucleus	41.32	39.46
AT5G57620.1	Thale cress	nucleus	41.01	39.04
HORVU6Hr1G083250.1	Barley	nucleus	44.48	38.84
Bra006811.1-P	Field mustard	nucleus	40.38	38.67
CDX88631	Canola	nucleus	40.38	38.67
CDY11860	Canola	nucleus	40.69	38.62
HORVU4Hr1G087730.1	Barley	nucleus	26.18	38.07
HORVU5Hr1G098540.1	Barley	nucleus	35.02	35.69
HORVU3Hr1G019590.2	Barley	nucleus	27.76	32.71
HORVU2Hr1G010450.2	Barley	nucleus	34.07	30.77
HORVU1Hr1G051980.2	Barley	nucleus	22.4	28.74
HORVU4Hr1G055680.1	Barley	nucleus	27.13	28.48
HORVU2Hr1G081720.2	Barley	nucleus	27.44	27.88
HORVU1Hr1G045090.1	Barley	nucleus	24.61	26.0
HORVU3Hr1G063460.4	Barley	nucleus	23.03	23.47
HORVU1Hr1G084170.4	Barley	nucleus	17.03	16.77

Protein Annotations

EnsemblPlants:HORVU1Hr1G061220.1	EnsemblPlantsGene:HORVU1Hr1G061220	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF946	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI000B487081	UniProt:A0A287FVJ3	MapMan:15.5.2.1	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:443961816..443963246

Molecular Weight (calculated)

35190.9 Da

IEP (calculated)

6.507

GRAVY (calculated)

-0.767

Length

317 amino acids

Sequence
(BLAST)

001: HTHRGEEMGR APCCDKATVK RGPWSPEEDA MLKAYIEERG TGNNWIALPH KIGLKRCGKS CRLRWLNYLR PNIKHGDFTP EEDSTICKLY ISIGSRWSII
101: AAQLPGRTDN DVKNYWNTKL KKRLLGGRRK DRGTGTQQHR QGELDGANND GEQQPLSASA MERIQLCMQL QEMQNPLSSI SNPLHLWQPS SHHQMAATAH
201: SNSNSSRSSS FDVTVAAEQG QSSSLNDQHL GGQQQLETRA TADGLASPSS AGNSNIVTIE AELQELIYSA AATTTVTQQG DVDWWSYDQG KSPVNCWDFT
301: PETSSVLQDY AAEVYDM

Best Arabidopsis Sequence Match ( AT5G57620.1 )
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV

Arabidopsis Description

MYB36Transcription factor MYB36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.