Factsheet for HORVU1Hr1G051980.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G201100.1	Wheat	nucleus	87.45	82.76
TraesCS1D01G204500.1	Wheat	nucleus	82.59	81.93
TraesCS1B01G215500.1	Wheat	nucleus	84.21	80.31
KXG38237	Sorghum	nucleus	51.42	49.61
Zm00001d013931_P001	Maize	nucleus	50.61	45.79
HORVU1Hr1G045090.1	Barley	nucleus	51.42	42.33
HORVU4Hr1G087730.1	Barley	nucleus	24.29	27.52
GSMUA_Achr4P01050_001	Banana	nucleus	25.1	27.43
HORVU3Hr1G068550.1	Barley	nucleus	23.48	26.61
GSMUA_Achr1P04910_001	Banana	nucleus	25.51	25.93
VIT_04s0008g00620.t01	Wine grape	nucleus	26.72	25.0
GSMUA_Achr7P25060_001	Banana	nucleus	29.55	25.0
HORVU7Hr1G096190.1	Barley	nucleus	25.51	24.23
HORVU3Hr1G019590.2	Barley	nucleus	25.51	23.42
HORVU5Hr1G063410.1	Barley	nucleus	28.34	23.26
HORVU5Hr1G098540.1	Barley	nucleus	29.15	23.15
KRH15488	Soybean	nucleus	27.53	22.52
HORVU1Hr1G061220.1	Barley	nucleus	28.74	22.4
KRH05529	Soybean	nucleus	27.94	22.33
HORVU2Hr1G081720.2	Barley	nucleus	27.13	21.47
HORVU4Hr1G055680.1	Barley	nucleus	25.91	21.19
HORVU2Hr1G010450.2	Barley	nucleus	27.53	19.37
HORVU6Hr1G083250.1	Barley	nucleus	28.34	19.28
HORVU4Hr1G055640.1	Barley	cytosol	2.83	16.28
HORVU3Hr1G063460.4	Barley	nucleus	18.22	14.47
HORVU1Hr1G084170.4	Barley	nucleus	9.72	7.45

Protein Annotations

EnsemblPlants:HORVU1Hr1G051980.2	EnsemblPlantsGene:HORVU1Hr1G051980	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF933	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI000294B256	UniProt:M0YS59	MapMan:15.5.2.1	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:385458674..385460131

Molecular Weight (calculated)

26865.8 Da

IEP (calculated)

5.381

GRAVY (calculated)

-0.421

Length

247 amino acids

Sequence
(BLAST)

001: MVKKGKWSRE EDDLMRRHIV KYGVGRSWQA LAETLGLQRC GRSCRARWLN YLRPGLKHGN FTPAEESIIC EMYSKRGSCW SVIAAQLPGR TDLAVKNYWN
101: GTISKRHRPS SSTTSDATKP EELALVVHDE ESSTTGSPCH AAGSFVVAPV LAGSSTPVQG QPPLAVGGCN AAKEEVGETV PVERKPAMAP APLPENAPAP
201: PGDEASAMDM VCAPMSRIPQ ASMEPDDMPL IDGFDEIDSF LPWFDDW

Best Arabidopsis Sequence Match ( AT4G37780.1 )
(BLAST)

001: MGRAPCCDKM AVKKGPWSTE EDAVLKSYIE KHGTGNNWIS LPQRIGIKRC GKSCRLRWLN YLRPNLKHGG FTDEEDYIIC SLYITIGSRW SIIASQLPGR
101: TDNDIKNYWN TRLKKKLLSK QGKAFHQQLN VKFERGTTSS SSSQNQIQIF HDENTKSNQT LYNQVVDPSM RAFAMEEQSM IKNQILEPFS WEPNKVLFDV
201: DYDAAASSYH HHASPSLNSM SSTSSIGTNN SSLQMSHYTV NHNDHDQPDM FFMDGFENFQ AELFDEIANN NTVENGFDGT EILINNNYLD HDISSFIDYP
301: LYDNE

Arabidopsis Description

MYB87Transcription factor MYB87 [Source:UniProtKB/Swiss-Prot;Acc:F4JSU0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.