Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15488 | Soybean | nucleus | 90.61 | 92.72 |
| GSMUA_Achr4P01050_001 | Banana | nucleus | 35.6 | 48.67 |
| VIT_04s0008g00620.t01 | Wine grape | nucleus | 41.42 | 48.48 |
| GSMUA_Achr1P04910_001 | Banana | nucleus | 34.3 | 43.62 |
| KRH74186 | Soybean | nucleus | 36.25 | 42.91 |
| KRH49024 | Soybean | nucleus | 35.6 | 42.31 |
| KRH60169 | Soybean | nucleus | 32.04 | 39.92 |
| GSMUA_Achr7P25060_001 | Banana | nucleus | 36.89 | 39.04 |
| KRH19894 | Soybean | nucleus | 35.92 | 36.39 |
| KRH41459 | Soybean | nucleus | 22.98 | 35.86 |
| KRH32503 | Soybean | nucleus | 35.92 | 34.69 |
| KRH25089 | Soybean | nucleus | 34.63 | 33.97 |
| KRH58168 | Soybean | nucleus | 36.25 | 33.43 |
| KRH26521 | Soybean | nucleus | 36.57 | 33.24 |
| KRH22841 | Soybean | nucleus | 36.57 | 33.24 |
| KRH04372 | Soybean | nucleus | 36.25 | 33.04 |
| KRG96025 | Soybean | nucleus | 34.95 | 32.73 |
| KRH30589 | Soybean | nucleus | 34.63 | 32.52 |
| KRH67733 | Soybean | nucleus | 33.66 | 32.3 |
| KRH61462 | Soybean | nucleus | 35.92 | 31.71 |
| KRH77168 | Soybean | nucleus | 35.6 | 31.7 |
| KRH52158 | Soybean | nucleus | 36.25 | 31.55 |
| KRH28317 | Soybean | nucleus | 34.95 | 31.03 |
| KRG93460 | Soybean | nucleus | 34.63 | 31.01 |
| KRH18986 | Soybean | nucleus | 35.92 | 30.66 |
| KRG88657 | Soybean | nucleus | 36.25 | 30.35 |
| KRH15479 | Soybean | nucleus | 35.6 | 30.22 |
| KRH02902 | Soybean | nucleus | 35.6 | 30.14 |
| TraesCS1D01G204500.1 | Wheat | nucleus | 23.3 | 28.92 |
| KRH63439 | Soybean | nucleus | 24.6 | 28.57 |
| KRH18536 | Soybean | endoplasmic reticulum | 33.98 | 28.0 |
| HORVU1Hr1G051980.2 | Barley | nucleus | 22.33 | 27.94 |
| KRH46482 | Soybean | nucleus | 29.13 | 27.69 |
| KRG98401 | Soybean | nucleus | 29.13 | 27.61 |
| TraesCS1A01G201100.1 | Wheat | nucleus | 23.3 | 27.59 |
| TraesCS1B01G215500.1 | Wheat | nucleus | 22.65 | 27.03 |
| Zm00001d013931_P001 | Maize | nucleus | 23.3 | 26.37 |
| KXG38237 | Sorghum | nucleus | 21.68 | 26.17 |
| HORVU1Hr1G045090.1 | Barley | nucleus | 23.62 | 24.33 |
| TraesCS1A01G169400.1 | Wheat | nucleus | 22.01 | 23.13 |
| KRH54481 | Soybean | nucleus | 23.62 | 22.12 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100789985 | MapMan:15.5.2.1 | EMBL:ACUP02010746 | EnsemblPlantsGene:GLYMA_17G231900 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7MNI7 | EnsemblPlants:KRH05529 | ProteinID:KRH05529 |
| ProteinID:KRH05529.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF694 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000233E50C | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr17:-:38684051..38687303
Molecular Weight (calculated)
34396.1 Da
IEP (calculated)
7.249
GRAVY (calculated)
-0.699
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKA NVKRGPWSPE EDATLKNYVE THGTGGNWIA LPKKAGLRRC GKSCRLRWLN YLRPDIKHGG FTEEEDNIIC TLYAQMGSRW SAIASKLPGR
101: TDNDVKNYWN TKLKKKIMAR KVTLKTLTHN DTLPSTSTPS SLTNNQNVKT SQNSPFPSQN QNSPPSVLPV LDANNALFIT NNEKSIISFD QTHHGLYSPQ
201: VMDDVVSQIG ASSRIINNNN NNNPMLSLSQ EGSSSISDSS SIAMNNNNVS HPEQQHASDE SMEMLMDFGF GFPFDFANGP NCHYERVGEF ATSSYPEWVD
301: FSYADIKPH
101: TDNDVKNYWN TKLKKKIMAR KVTLKTLTHN DTLPSTSTPS SLTNNQNVKT SQNSPFPSQN QNSPPSVLPV LDANNALFIT NNEKSIISFD QTHHGLYSPQ
201: VMDDVVSQIG ASSRIINNNN NNNPMLSLSQ EGSSSISDSS SIAMNNNNVS HPEQQHASDE SMEMLMDFGF GFPFDFANGP NCHYERVGEF ATSSYPEWVD
301: FSYADIKPH
001: MGRAPCCDKA NVKRGPWSPE EDAKLKDYIE KQGTGGNWIA LPHKAGLRRC GKSCRLRWLN YLRPNIRHGD FTEEEDNIIY SLFASIGSRW SVIAAHLQGR
101: TDNDIKNYWN TKLKKKLIAT MAPPPHHHLA IATSSSSASP SSSSHYNMIN SLLPYNPSTN QLLTPHQGIM MTMMGQQQQL FYQEDMGNLV NSPNRNNLIM
201: SHQEDNQEQS TNKGIMLLSD VRSGSSTTST VTRVKMEHRD HDDHHHHHEE DERSMTSVVM EDYGMEEIKQ LISSSCTSSN NSLWFDENKT EDKFMLYY
101: TDNDIKNYWN TKLKKKLIAT MAPPPHHHLA IATSSSSASP SSSSHYNMIN SLLPYNPSTN QLLTPHQGIM MTMMGQQQQL FYQEDMGNLV NSPNRNNLIM
201: SHQEDNQEQS TNKGIMLLSD VRSGSSTTST VTRVKMEHRD HDDHHHHHEE DERSMTSVVM EDYGMEEIKQ LISSSCTSSN NSLWFDENKT EDKFMLYY
Arabidopsis Description
RAX2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT2G36890]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.