Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P01050_001 | Banana | nucleus | 62.96 | 67.7 |
| GSMUA_Achr5P09280_001 | Banana | nucleus | 43.21 | 54.69 |
| GSMUA_Achr4P28090_001 | Banana | nucleus | 41.15 | 44.25 |
| GSMUA_Achr5P21840_001 | Banana | nucleus | 36.21 | 42.51 |
| GSMUA_Achr1P03140_001 | Banana | nucleus | 42.39 | 40.55 |
| VIT_04s0008g00620.t01 | Wine grape | nucleus | 43.62 | 40.15 |
| GSMUA_Achr9P09790_001 | Banana | nucleus | 41.15 | 38.02 |
| GSMUA_Achr10P... | Banana | nucleus | 41.56 | 37.69 |
| GSMUA_Achr11P... | Banana | nucleus | 39.92 | 37.16 |
| GSMUA_Achr5P01930_001 | Banana | nucleus | 42.8 | 37.01 |
| GSMUA_Achr4P32240_001 | Banana | nucleus | 41.98 | 36.56 |
| GSMUA_Achr7P25060_001 | Banana | nucleus | 43.62 | 36.3 |
| GSMUA_Achr4P25260_001 | Banana | nucleus | 40.74 | 35.48 |
| KRH15488 | Soybean | nucleus | 43.62 | 35.1 |
| GSMUA_Achr5P10690_001 | Banana | nucleus | 39.92 | 34.77 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.68 | 34.43 |
| GSMUA_Achr7P08150_001 | Banana | nucleus | 36.21 | 34.38 |
| KRH05529 | Soybean | nucleus | 43.62 | 34.3 |
| GSMUA_Achr6P30830_001 | Banana | nucleus | 44.44 | 34.29 |
| GSMUA_Achr8P24780_001 | Banana | nucleus | 42.8 | 33.88 |
| GSMUA_Achr5P22760_001 | Banana | nucleus | 42.39 | 32.59 |
| GSMUA_Achr6P31740_001 | Banana | nucleus | 44.86 | 32.54 |
| GSMUA_Achr8P14190_001 | Banana | nucleus | 41.15 | 31.95 |
| GSMUA_Achr9P13610_001 | Banana | nucleus | 40.33 | 31.61 |
| GSMUA_Achr6P01850_001 | Banana | nucleus | 42.8 | 31.23 |
| GSMUA_Achr2P04200_001 | Banana | nucleus | 38.68 | 31.23 |
| GSMUA_Achr7P19530_001 | Banana | nucleus | 42.39 | 30.21 |
| GSMUA_Achr3P10060_001 | Banana | nucleus | 37.04 | 28.12 |
| KXG38237 | Sorghum | nucleus | 27.57 | 26.17 |
| Zm00001d013931_P001 | Maize | nucleus | 29.22 | 26.01 |
| HORVU1Hr1G051980.2 | Barley | nucleus | 25.93 | 25.51 |
| TraesCS1D01G204500.1 | Wheat | nucleus | 25.93 | 25.3 |
| TraesCS1A01G201100.1 | Wheat | nucleus | 26.34 | 24.52 |
| TraesCS1B01G215500.1 | Wheat | nucleus | 25.93 | 24.32 |
| HORVU1Hr1G045090.1 | Barley | nucleus | 27.98 | 22.67 |
| TraesCS1A01G169400.1 | Wheat | nucleus | 26.75 | 22.11 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P04910_001 | EnsemblPlants:GSMUA_Achr1T04910_001 | EnsemblPlantsGene:GSMUA_Achr1G04910_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF654 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000295104D | UniProt:M0RX49 | MapMan:15.5.2.1 | : | : |
Description
Myb-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G04910_001]
Coordinates
chr1:+:4071302..4072206
Molecular Weight (calculated)
26979.7 Da
IEP (calculated)
8.068
GRAVY (calculated)
-0.589
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKA KVKRGPWSPE EDAALKSYIQ CHGAVGNWIA LPHKAGLKRC GKSCRLRWLN YLRPDIKHGG FTEEEDSIIC TLYHRLGSRW SVIASHLPGR
101: TDNDVKNYWN TKLKKKLMAR RPCLPTTTTS DSKSPPLIGM PLHPNDGLSQ QSKKLYSDEE VSASSSSITA QHSSSFLNWS TGGAESSDLF LSELGFGDAG
201: DFLSSYGYQE RLGEEIPSYF SDPSQGMYQS LTYSLQSHAI HEV
101: TDNDVKNYWN TKLKKKLMAR RPCLPTTTTS DSKSPPLIGM PLHPNDGLSQ QSKKLYSDEE VSASSSSITA QHSSSFLNWS TGGAESSDLF LSELGFGDAG
201: DFLSSYGYQE RLGEEIPSYF SDPSQGMYQS LTYSLQSHAI HEV
001: MGRAPCCDKA NVKRGPWSPE EDAKLKDYIE KQGTGGNWIA LPHKAGLRRC GKSCRLRWLN YLRPNIRHGD FTEEEDNIIY SLFASIGSRW SVIAAHLQGR
101: TDNDIKNYWN TKLKKKLIAT MAPPPHHHLA IATSSSSASP SSSSHYNMIN SLLPYNPSTN QLLTPHQGIM MTMMGQQQQL FYQEDMGNLV NSPNRNNLIM
201: SHQEDNQEQS TNKGIMLLSD VRSGSSTTST VTRVKMEHRD HDDHHHHHEE DERSMTSVVM EDYGMEEIKQ LISSSCTSSN NSLWFDENKT EDKFMLYY
101: TDNDIKNYWN TKLKKKLIAT MAPPPHHHLA IATSSSSASP SSSSHYNMIN SLLPYNPSTN QLLTPHQGIM MTMMGQQQQL FYQEDMGNLV NSPNRNNLIM
201: SHQEDNQEQS TNKGIMLLSD VRSGSSTTST VTRVKMEHRD HDDHHHHHEE DERSMTSVVM EDYGMEEIKQ LISSSCTSSN NSLWFDENKT EDKFMLYY
Arabidopsis Description
RAX2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT2G36890]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.