Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P09280_001 | Banana | nucleus | 42.13 | 55.73 |
| GSMUA_Achr4P28090_001 | Banana | nucleus | 42.91 | 48.23 |
| GSMUA_Achr5P21840_001 | Banana | nucleus | 38.19 | 46.86 |
| GSMUA_Achr4P01050_001 | Banana | nucleus | 41.34 | 46.46 |
| GSMUA_Achr11P... | Banana | nucleus | 47.24 | 45.98 |
| GSMUA_Achr5P10690_001 | Banana | nucleus | 48.03 | 43.73 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.06 | 42.86 |
| GSMUA_Achr4P25260_001 | Banana | nucleus | 46.85 | 42.65 |
| GSMUA_Achr1P04910_001 | Banana | nucleus | 40.55 | 42.39 |
| GSMUA_Achr9P09790_001 | Banana | nucleus | 43.7 | 42.21 |
| HORVU7Hr1G096190.1 | Barley | nucleus | 42.91 | 41.92 |
| TraesCS7A01G414300.1 | Wheat | nucleus | 43.7 | 40.96 |
| TraesCS7D01G407500.1 | Wheat | nucleus | 42.52 | 40.75 |
| GSMUA_Achr2P04200_001 | Banana | nucleus | 48.03 | 40.53 |
| TraesCS7B01G314200.1 | Wheat | nucleus | 42.13 | 40.38 |
| GSMUA_Achr8P14190_001 | Banana | nucleus | 49.61 | 40.26 |
| GSMUA_Achr5P01930_001 | Banana | nucleus | 43.31 | 39.15 |
| GSMUA_Achr10P... | Banana | nucleus | 40.94 | 38.81 |
| Zm00001d005307_P001 | Maize | nucleus | 44.49 | 38.31 |
| VIT_06s0061g00470.t01 | Wine grape | nucleus | 47.64 | 38.17 |
| GSMUA_Achr4P32240_001 | Banana | nucleus | 41.73 | 37.99 |
| GSMUA_Achr7P08150_001 | Banana | nucleus | 38.19 | 37.89 |
| GSMUA_Achr9P13610_001 | Banana | nucleus | 45.28 | 37.1 |
| GSMUA_Achr6P30830_001 | Banana | nucleus | 45.67 | 36.83 |
| GSMUA_Achr5P22760_001 | Banana | nucleus | 44.49 | 35.76 |
| GSMUA_Achr7P25060_001 | Banana | nucleus | 40.55 | 35.27 |
| KXG35154 | Sorghum | nucleus | 44.09 | 35.0 |
| GSMUA_Achr8P24780_001 | Banana | nucleus | 42.13 | 34.85 |
| VIT_08s0007g05030.t01 | Wine grape | nucleus | 46.85 | 34.8 |
| GSMUA_Achr6P01850_001 | Banana | nucleus | 44.49 | 33.93 |
| GSMUA_Achr6P31740_001 | Banana | nucleus | 43.31 | 32.84 |
| GSMUA_Achr7P19530_001 | Banana | nucleus | 42.91 | 31.96 |
| GSMUA_Achr3P10060_001 | Banana | nucleus | 34.25 | 27.19 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P03140_001 | EnsemblPlants:GSMUA_Achr1T03140_001 | EnsemblPlantsGene:GSMUA_Achr1G03140_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF654 | PFAM:PF00249 | PFscan:PS51294 | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI0002964940 | UniProt:M0RWM2 | MapMan:15.5.2.1 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G03140_001]
Coordinates
chr1:-:2527188..2528283
Molecular Weight (calculated)
28532.7 Da
IEP (calculated)
8.031
GRAVY (calculated)
-0.677
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKA NVKKGPWSPE EDSKLKEFIE KHGTGGNWIA LPHKAGLKRC GKSCRLRWLN YLRPNIKHGE FSEEEDRIIC SLFATIGSRW SVIASQLPGR
101: TDNDIKNHWN TKLKKKLLGI APSQRKPQGF PATSHDMWKS FPTAAISSDL LQVPYHQHHT ITFSSHDGSC TRFSDVKDGL EDIYGAMEGN KLFLEGGCQV
201: DNNGPEYNHE EIKQLLISTF GHCNNGSMNN NPIANTFLTA NMKRSDLDDE YVSL
101: TDNDIKNHWN TKLKKKLLGI APSQRKPQGF PATSHDMWKS FPTAAISSDL LQVPYHQHHT ITFSSHDGSC TRFSDVKDGL EDIYGAMEGN KLFLEGGCQV
201: DNNGPEYNHE EIKQLLISTF GHCNNGSMNN NPIANTFLTA NMKRSDLDDE YVSL
001: MSLSLIITEP ENSFSFPFFS FKKQNKDIST KTLRPRETDR EMGRAPCCDK ANVKRGPWSP EEDAKLKDYI EKQGTGGNWI ALPHKAGLRR CGKSCRLRWL
101: NYLRPNIRHG DFTEEEDNII YSLFASIGSR WSVIAAHLQG RTDNDIKNYW NTKLKKKLIA TMAPPPHHHL AIATSSSSAS PSSSSHYNMI NSLLPYNPST
201: NQLLTPHQGI MMTMMGQQQQ LFYQEDMGNL VNSPNRNNLI MSHQEDNQEQ STNKGIMLLS DVRSGSSTTS TVTRVKMEHR DHDDHHHHHE EDERSMTSVV
301: MEDYGMEEIK QLISSSCTSS NNSLWFDENK TEDKFMLYY
101: NYLRPNIRHG DFTEEEDNII YSLFASIGSR WSVIAAHLQG RTDNDIKNYW NTKLKKKLIA TMAPPPHHHL AIATSSSSAS PSSSSHYNMI NSLLPYNPST
201: NQLLTPHQGI MMTMMGQQQQ LFYQEDMGNL VNSPNRNNLI MSHQEDNQEQ STNKGIMLLS DVRSGSSTTS TVTRVKMEHR DHDDHHHHHE EDERSMTSVV
301: MEDYGMEEIK QLISSSCTSS NNSLWFDENK TEDKFMLYY
Arabidopsis Description
RAX2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT2G36890]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.