Factsheet for TraesCS7A01G414300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G314200.1	Wheat	nucleus	91.51	93.58
HORVU7Hr1G096190.1	Barley	nucleus	89.67	93.46
TraesCS7D01G407500.1	Wheat	nucleus	90.41	92.45
TraesCS3A01G264900.1	Wheat	nucleus	23.99	73.03
GSMUA_Achr1P03140_001	Banana	nucleus	40.96	43.7
Zm00001d005307_P001	Maize	nucleus	47.23	43.39
KXG35154	Sorghum	nucleus	47.23	40.0
GSMUA_Achr5P10690_001	Banana	nucleus	40.96	39.78
GSMUA_Achr4P25260_001	Banana	nucleus	38.38	37.28
VIT_06s0061g00470.t01	Wine grape	nucleus	42.44	36.28
GSMUA_Achr8P14190_001	Banana	nucleus	41.33	35.78
TraesCS5A01G217900.1	Wheat	nucleus	38.01	33.33
TraesCS5A01G405800.1	Wheat	nucleus	38.01	33.12
TraesCS1A01G252600.1	Wheat	nucleus	38.75	32.71
TraesCS3A01G108000.1	Wheat	nucleus	31.73	32.21
VIT_08s0007g05030.t01	Wine grape	nucleus	40.59	32.16
TraesCS1A01G379700.1	Wheat	nucleus	36.16	31.72
TraesCS5A01G534400.1	Wheat	nucleus	31.0	31.34
TraesCS2A01G069300.1	Wheat	nucleus	40.22	31.32
TraesCS6A01G344700.1	Wheat	nucleus	40.96	30.41
TraesCS3A01G286600.1	Wheat	nucleus	32.47	30.24
TraesCS4A01G113000.1	Wheat	nucleus	33.58	29.64
TraesCS1A01G201100.1	Wheat	nucleus	24.35	25.29
TraesCS1A01G169400.1	Wheat	nucleus	25.83	23.81
TraesCS2A01G331200.1	Wheat	nucleus	29.89	23.01

Protein Annotations

EnsemblPlants:TraesCS7A01G414300.1	EnsemblPlantsGene:TraesCS7A01G414300	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF654	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
TIGR:cd00167	MapMan:15.5.2.1	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:604853049..604853949

Molecular Weight (calculated)

29387.3 Da

IEP (calculated)

7.976

GRAVY (calculated)

-0.493

Length

271 amino acids

Sequence
(BLAST)

001: MGRAPCCDKG SVKKGPWSPE EDRKLKDYIH THGTGGNWIA LPTKAGLKRC GKSCRLRWLN YLRPNIKHGD FSEEEDRVIC ALFAAIGSRW SIIAAQLPGR
101: TDNDVKNYWN TKLKKKQLHL LIAAAAQSTH GQQYSSRPPA PPFTVEHHHH TSSTSAASLG QLLMFGVGGG DHHQQQQYMS SSSSVDISNN TSAAAAAAAA
201: AGLQESFMFG GLQFQQQEED TNSLLSPAAA ASGNDIMTYE HHEMISPSSF FFYGDGAGGA AATQEGTRFL Y

Best Arabidopsis Sequence Match ( AT5G23000.1 )
(BLAST)

001: MGRAPCCDKT KVKRGPWSPE EDSKLRDYIE KYGNGGNWIS FPLKAGLRRC GKSCRLRWLN YLRPNIKHGD FSEEEDRIIF SLFAAIGSRW SIIAAHLPGR
101: TDNDIKNYWN TKLRKKLLSS SSDSSSSAMA SPYLNPISQD VKRPTSPTTI PSSSYNPYAE NPNQYPTKSL ISSINGFEAG DKQIISYINP NYPQDLYLSD
201: SNNNTSNANG FLLNHNMCDQ YKNHTSFSSD VNGIRSEIMM KQEEIMMMMM IDHHIDQRTK GYNGEFTQGY YNYYNGHGDL KQMISGTGTN SNINMGGSGS
301: SSSSISNLAE NKSSGSLLLE YKCLPYFYS

Arabidopsis Description

RAX1Transcription factor RAX1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG68]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.