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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G096190.1 Barley nucleus 90.57 92.31
TraesCS7D01G407500.1 Wheat nucleus 91.7 91.7
TraesCS7A01G414300.1 Wheat nucleus 93.58 91.51
Zm00001d005307_P001 Maize nucleus 48.3 43.39
GSMUA_Achr1P03140_001 Banana nucleus 40.38 42.13
KXG35154 Sorghum nucleus 48.68 40.31
GSMUA_Achr5P10690_001 Banana nucleus 41.51 39.43
GSMUA_Achr4P25260_001 Banana nucleus 39.25 37.28
VIT_06s0061g00470.t01 Wine grape nucleus 44.15 36.91
GSMUA_Achr8P14190_001 Banana nucleus 40.75 34.5
TraesCS5B01G216900.1 Wheat nucleus 38.87 33.55
TraesCS5B01G410500.1 Wheat nucleus 39.25 33.44
TraesCS1B01G265400.1 Wheat nucleus 39.25 32.7
TraesCS3B01G298200.1 Wheat nucleus 36.98 32.67
VIT_08s0007g05030.t01 Wine grape nucleus 40.75 31.58
TraesCS3B01G126800.1 Wheat nucleus 32.08 31.48
TraesCS4B01G366600.1 Wheat nucleus 31.7 31.11
TraesCS1B01G401700.1 Wheat nucleus 36.6 31.09
TraesCS2B01G082400.1 Wheat nucleus 40.38 30.48
TraesCS6B01G377400.1 Wheat nucleus 40.75 29.67
TraesCS4B01G191200.1 Wheat nucleus 34.34 29.55
TraesCS1B01G215500.1 Wheat nucleus 25.28 25.87
TraesCS3B01G320800.1 Wheat nucleus, plastid 32.83 23.77
TraesCS2B01G351000.1 Wheat nucleus 31.32 23.58
Protein Annotations
EnsemblPlants:TraesCS7B01G314200.1EnsemblPlantsGene:TraesCS7B01G314200Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:Homeobox-like_sfInterPro:IPR017930InterPro:Myb_domInterPro:SANT/MybPANTHER:PTHR10641
PANTHER:PTHR10641:SF654PFAM:PF00249PFscan:PS51294SEG:segSMART:SM00717SUPFAM:SSF46689
TIGR:cd00167MapMan:15.5.2.1::::
Description
No Description!
Coordinates
chr7B:-:561279959..561280847
Molecular Weight (calculated)
28870.8 Da
IEP (calculated)
7.916
GRAVY (calculated)
-0.506
Length
265 amino acids
Sequence
(BLAST)
001: MGRAPCCDKG SVKKGPWSPE EDRKLKDYIH THGTGGNWIA LPTKAGLKRC GKSCRLRWLN YLRPNIKHGD FSDEEDRVIC ALFAAIGSRW SIIAAQLPGR
101: TDNDVKNYWN TKLKKKQLHL LIAASAHGQQ YGSRPPAPPF TLEHHHTSST SAASLGQLLM FGVGGGDHHH QQQQQQYMSS CSSVDISNNA SAAAALGLQE
201: SFMFGGLEFQ QQEEDANNLL SPAAAASGSD TMTYEHHAMI SPSGFFFYGD GAGAAATQEG TRFLY
Best Arabidopsis Sequence Match ( AT5G23000.1 )
(BLAST)
001: MGRAPCCDKT KVKRGPWSPE EDSKLRDYIE KYGNGGNWIS FPLKAGLRRC GKSCRLRWLN YLRPNIKHGD FSEEEDRIIF SLFAAIGSRW SIIAAHLPGR
101: TDNDIKNYWN TKLRKKLLSS SSDSSSSAMA SPYLNPISQD VKRPTSPTTI PSSSYNPYAE NPNQYPTKSL ISSINGFEAG DKQIISYINP NYPQDLYLSD
201: SNNNTSNANG FLLNHNMCDQ YKNHTSFSSD VNGIRSEIMM KQEEIMMMMM IDHHIDQRTK GYNGEFTQGY YNYYNGHGDL KQMISGTGTN SNINMGGSGS
301: SSSSISNLAE NKSSGSLLLE YKCLPYFYS
Arabidopsis Description
RAX1Transcription factor RAX1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG68]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.