Factsheet for TraesCS2B01G351000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G331700.1	Wheat	nucleus	97.44	97.44
TraesCS2A01G331200.1	Wheat	nucleus	96.02	96.02
Zm00001d025664_P001	Maize	nucleus	80.97	80.06
EES12341	Sorghum	nucleus	82.95	78.71
CDY64987	Canola	nucleus	47.44	69.87
VIT_19s0015g01280.t01	Wine grape	nucleus	63.35	67.58
KRG98401	Soybean	nucleus	58.52	63.19
KRH46482	Soybean	nucleus	57.95	62.77
PGSC0003DMT400022402	Potato	nucleus	57.39	61.59
HORVU2Hr1G081720.2	Barley	nucleus	53.69	60.58
Solyc10g005760.1.1	Tomato	nucleus	57.67	60.42
AT5G56110.1	Thale cress	nucleus	52.84	58.12
Bra035604.1-P	Field mustard	nucleus	52.84	58.12
CDY17391	Canola	nucleus	52.56	57.81
Bra002847.1-P	Field mustard	nucleus	52.27	57.5
CDY57424	Canola	nucleus	51.7	56.88
TraesCS4B01G191200.1	Wheat	nucleus	34.09	38.96
TraesCS3B01G126800.1	Wheat	nucleus	26.42	34.44
TraesCS7B01G314200.1	Wheat	nucleus	23.58	31.32
TraesCS5B01G410500.1	Wheat	nucleus	26.42	29.9
TraesCS5B01G216900.1	Wheat	nucleus	25.57	29.32
TraesCS1B01G265400.1	Wheat	nucleus	26.14	28.93
TraesCS4B01G366600.1	Wheat	nucleus	21.88	28.52
TraesCS3B01G298200.1	Wheat	nucleus	23.86	28.0
TraesCS1B01G215500.1	Wheat	nucleus	19.6	26.64
TraesCS1B01G401700.1	Wheat	nucleus	23.58	26.6
TraesCS6B01G377400.1	Wheat	nucleus	25.28	24.45
TraesCS2B01G082400.1	Wheat	nucleus	23.58	23.65
TraesCS3B01G320800.1	Wheat	nucleus, plastid	23.01	22.13

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	MapMan:21.8.1.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003682	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0007275	GO:GO:0008150	GO:GO:0009555	GO:GO:0009653	GO:GO:0009791
GO:GO:0009908	GO:GO:0009987	GO:GO:0010090	GO:GO:0016043	GO:GO:0030154	GO:GO:0043565
GO:GO:0048658	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294
PANTHER:PTHR10641	PANTHER:PTHR10641:SF653	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	EnsemblPlantsGene:TraesCS2B01G351000
EnsemblPlants:TraesCS2B01G351000.1	TIGR:cd00167	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2B:-:498309610..498311157

Molecular Weight (calculated)

37895.7 Da

IEP (calculated)

6.131

GRAVY (calculated)

-0.545

Length

352 amino acids

Sequence
(BLAST)

001: MGRIPCCEKD NVKRGQWTPE EDNKLLSYIT QHGTRNWRLI PKNAGLQRCG KSCRLRWTNY LRPDLKHGEF TDAEEQTIIK LHSVVGNRWS VIAAQLPGRT
101: DNDVKNHWNT KLKKKLSGMG IDPVTHKSFS HLMAEIATTL APPQVAHLAE AALGCFKDEM LHLLTKKRPT DFPSPAIPDM AAGASGGMAM GSGALITPCF
201: NAPPQADDTI ERIKMGLSRA IMSEPAAPAA DKPWPSGDMS EGLAGMYAAF NPAHATEFRY EGTASGYVLG GDGDRGTSMW SHHSMYSGSS GTEGGRPALQ
301: EKGNDSVGSS GGDDEAEDGK EGGKGASDMS GLFGSDCVLW DLPDELTNNM CD

Best Arabidopsis Sequence Match ( AT5G56110.1 )
(BLAST)

001: MGRIPCCEKE NVKRGQWTPE EDNKLASYIA QHGTRNWRLI PKNAGLQRCG KSCRLRWTNY LRPDLKHGQF SEAEEHIIVK FHSVLGNRWS LIAAQLPGRT
101: DNDVKNYWNT KLKKKLSGMG IDPVTHKPFS HLMAEITTTL NPPQVSHLAE AALGCFKDEM LHLLTKKRVD LNQINFSNHN PNPNNFHEIA DNEAGKIKMD
201: GLDHGNGIMK LWDMGNGFSY GSSSSSFGNE ERNDGSASPA VAAWRGHGGI RTAVAETAAA EEEERRKLKG EVVDQEEIGS EGGRGDGMTM MRNHHHHQHV
301: FNVDNVLWDL QADDLINHMV

Arabidopsis Description

MYB80MYB80 [Source:UniProtKB/TrEMBL;Acc:A0A178UM75]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.