Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG98401 | Soybean | nucleus | 92.92 | 92.64 |
| VIT_19s0015g01280.t01 | Wine grape | nucleus | 78.15 | 76.97 |
| CDY64987 | Canola | nucleus | 52.0 | 70.71 |
| PGSC0003DMT400022402 | Potato | nucleus | 65.85 | 65.24 |
| Solyc10g005760.1.1 | Tomato | nucleus | 65.85 | 63.69 |
| Bra035604.1-P | Field mustard | nucleus | 58.15 | 59.06 |
| AT5G56110.1 | Thale cress | nucleus | 58.15 | 59.06 |
| CDY17391 | Canola | nucleus | 57.54 | 58.44 |
| TraesCS2D01G331700.1 | Wheat | nucleus | 63.08 | 58.24 |
| TraesCS2A01G331200.1 | Wheat | nucleus | 63.08 | 58.24 |
| Bra002847.1-P | Field mustard | nucleus | 57.23 | 58.12 |
| CDY57424 | Canola | nucleus | 57.23 | 58.12 |
| TraesCS2B01G351000.1 | Wheat | nucleus | 62.77 | 57.95 |
| Zm00001d025664_P001 | Maize | nucleus | 60.31 | 55.06 |
| EES12341 | Sorghum | nucleus | 60.92 | 53.37 |
| HORVU2Hr1G081720.2 | Barley | nucleus | 50.46 | 52.56 |
| KRH63439 | Soybean | nucleus | 27.69 | 33.83 |
| KRG93460 | Soybean | nucleus | 35.08 | 33.04 |
| KRH60169 | Soybean | nucleus | 24.92 | 32.66 |
| KRH49024 | Soybean | nucleus | 25.85 | 32.31 |
| KRH74186 | Soybean | nucleus | 25.85 | 32.18 |
| KRH18536 | Soybean | endoplasmic reticulum | 34.77 | 30.13 |
| KRH41459 | Soybean | nucleus | 18.15 | 29.8 |
| KRH15488 | Soybean | nucleus | 27.38 | 29.47 |
| KRH05529 | Soybean | nucleus | 27.69 | 29.13 |
| KRH25089 | Soybean | nucleus | 27.69 | 28.57 |
| KRH30589 | Soybean | nucleus | 28.31 | 27.96 |
| KRH19894 | Soybean | nucleus | 26.15 | 27.87 |
| KRH32503 | Soybean | nucleus | 26.46 | 26.88 |
| KRH58168 | Soybean | nucleus | 27.69 | 26.87 |
| KRH54481 | Soybean | nucleus | 27.08 | 26.67 |
| KRH61462 | Soybean | nucleus | 28.31 | 26.29 |
| KRH04372 | Soybean | nucleus | 27.38 | 26.25 |
| KRH52158 | Soybean | nucleus | 28.62 | 26.2 |
| KRH77168 | Soybean | nucleus | 27.38 | 25.65 |
| KRH26521 | Soybean | nucleus | 26.77 | 25.59 |
| KRH22841 | Soybean | nucleus | 26.46 | 25.29 |
| KRH67733 | Soybean | nucleus | 24.92 | 25.16 |
| KRH28317 | Soybean | nucleus | 26.77 | 25.0 |
| KRG88657 | Soybean | nucleus | 28.31 | 24.93 |
| KRG96025 | Soybean | nucleus | 25.23 | 24.85 |
| KRH15479 | Soybean | nucleus | 27.69 | 24.73 |
| KRH02902 | Soybean | nucleus | 26.15 | 23.29 |
| KRH18986 | Soybean | nucleus | 25.85 | 23.2 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100800883 | MapMan:15.5.2.1 | MapMan:21.8.1.1 | UniProt:A0A0R0IZR8 | EMBL:ACUP02005346 |
| EnsemblPlantsGene:GLYMA_08G336500 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KRH46482 |
| ProteinID:KRH46482 | ProteinID:KRH46482.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF653 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00023390D2 | SEG:seg |
Description
hypothetical protein
Coordinates
chr8:-:45350316..45351485
Molecular Weight (calculated)
36329.0 Da
IEP (calculated)
7.342
GRAVY (calculated)
-0.542
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRIPCCEKD NVKRGQWTPE EDNKLSSYIV QHGTRNWRLI PKNAGLQRCG KSCRLRWTNY LRPDLKHGQF SDSEEQTIVK LHSVFGNRWS LIAAQLPGRT
101: DNDVKNHWNT KLKKKLSGMG IDPVTHKPFS HLMAEIATTL APPQAAHLAE AALGCFKDEV LHLLTKKPIN FHQGQHSTAA LGNNFTDYVN CKPDEKDATV
201: EKIKFDLSKA IQHDPEIMPA NKPWDSNATT SANFAMPYGV FPTMSGFQLS PVSFSKGHAS QWSQSVCTGS TCTAMDQQIQ LHEKLEAEIG DDSEATKEIR
301: NLSNIFSSDC VVWDLPADDL INPMV
101: DNDVKNHWNT KLKKKLSGMG IDPVTHKPFS HLMAEIATTL APPQAAHLAE AALGCFKDEV LHLLTKKPIN FHQGQHSTAA LGNNFTDYVN CKPDEKDATV
201: EKIKFDLSKA IQHDPEIMPA NKPWDSNATT SANFAMPYGV FPTMSGFQLS PVSFSKGHAS QWSQSVCTGS TCTAMDQQIQ LHEKLEAEIG DDSEATKEIR
301: NLSNIFSSDC VVWDLPADDL INPMV
001: MGRIPCCEKE NVKRGQWTPE EDNKLASYIA QHGTRNWRLI PKNAGLQRCG KSCRLRWTNY LRPDLKHGQF SEAEEHIIVK FHSVLGNRWS LIAAQLPGRT
101: DNDVKNYWNT KLKKKLSGMG IDPVTHKPFS HLMAEITTTL NPPQVSHLAE AALGCFKDEM LHLLTKKRVD LNQINFSNHN PNPNNFHEIA DNEAGKIKMD
201: GLDHGNGIMK LWDMGNGFSY GSSSSSFGNE ERNDGSASPA VAAWRGHGGI RTAVAETAAA EEEERRKLKG EVVDQEEIGS EGGRGDGMTM MRNHHHHQHV
301: FNVDNVLWDL QADDLINHMV
101: DNDVKNYWNT KLKKKLSGMG IDPVTHKPFS HLMAEITTTL NPPQVSHLAE AALGCFKDEM LHLLTKKRVD LNQINFSNHN PNPNNFHEIA DNEAGKIKMD
201: GLDHGNGIMK LWDMGNGFSY GSSSSSFGNE ERNDGSASPA VAAWRGHGGI RTAVAETAAA EEEERRKLKG EVVDQEEIGS EGGRGDGMTM MRNHHHHQHV
301: FNVDNVLWDL QADDLINHMV
Arabidopsis Description
MYB80MYB80 [Source:UniProtKB/TrEMBL;Acc:A0A178UM75]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.