Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH63439 | Soybean | nucleus | 63.94 | 79.32 |
| VIT_17s0000g05400.t01 | Wine grape | nucleus | 38.48 | 41.5 |
| PGSC0003DMT400062839 | Potato | nucleus | 37.58 | 40.39 |
| Solyc03g113530.2.1 | Tomato | nucleus | 42.12 | 39.15 |
| GSMUA_Achr3P10060_001 | Banana | nucleus | 31.21 | 32.19 |
| TraesCS4A01G113000.1 | Wheat | nucleus | 28.18 | 30.29 |
| TraesCS4D01G192400.1 | Wheat | nucleus | 28.18 | 30.19 |
| TraesCS4B01G191200.1 | Wheat | nucleus | 28.18 | 30.19 |
| HORVU4Hr1G055680.1 | Barley | nucleus | 27.58 | 30.13 |
| KRH41459 | Soybean | nucleus | 17.88 | 29.8 |
| Zm00001d028777_P001 | Maize | nucleus | 28.79 | 29.78 |
| KRG93460 | Soybean | nucleus | 30.61 | 29.28 |
| OQU92760 | Sorghum | nucleus | 29.09 | 29.27 |
| KRH60169 | Soybean | nucleus | 20.91 | 27.82 |
| KRH49024 | Soybean | nucleus | 21.52 | 27.31 |
| KRH74186 | Soybean | nucleus | 21.52 | 27.2 |
| KRH18536 | Soybean | endoplasmic reticulum | 30.91 | 27.2 |
| Os03t0296000-00 | Rice | nucleus | 8.48 | 27.18 |
| KRH46482 | Soybean | nucleus | 26.67 | 27.08 |
| KRG98401 | Soybean | nucleus | 26.67 | 26.99 |
| KRH19894 | Soybean | nucleus | 22.73 | 24.59 |
| KRH25089 | Soybean | nucleus | 23.33 | 24.44 |
| KRH15488 | Soybean | nucleus | 22.12 | 24.17 |
| KRH32503 | Soybean | nucleus | 23.33 | 24.06 |
| KRH58168 | Soybean | nucleus | 24.24 | 23.88 |
| KRH30589 | Soybean | nucleus | 23.64 | 23.71 |
| KRH05529 | Soybean | nucleus | 22.12 | 23.62 |
| KRH04372 | Soybean | nucleus | 24.24 | 23.6 |
| KRH61462 | Soybean | nucleus | 23.03 | 21.71 |
| KRH15479 | Soybean | nucleus | 23.94 | 21.7 |
| KRH77168 | Soybean | nucleus | 22.73 | 21.61 |
| KRH18986 | Soybean | nucleus | 23.64 | 21.55 |
| KRH52158 | Soybean | nucleus | 23.03 | 21.41 |
| KRH28317 | Soybean | nucleus | 22.42 | 21.26 |
| KRG96025 | Soybean | nucleus | 21.21 | 21.21 |
| KRH26521 | Soybean | nucleus | 21.82 | 21.18 |
| KRH22841 | Soybean | nucleus | 21.82 | 21.18 |
| KRH67733 | Soybean | nucleus | 20.61 | 21.12 |
| KRH02902 | Soybean | nucleus | 23.33 | 21.1 |
| KRG88657 | Soybean | nucleus | 23.33 | 20.87 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100795381 | MapMan:15.5.2.1 | EMBL:ACUP02003532 | EnsemblPlantsGene:GLYMA_06G188400 | GO:GO:0000003 |
| GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006357 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 |
| GO:GO:0009908 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0048443 |
| InterPro:Homeobox-like_sf | InterPro:IPR017877 | InterPro:IPR017930 | UniProt:K7KVV6 | EnsemblPlants:KRH54481 | ProteinID:KRH54481 |
| ProteinID:KRH54481.1 | InterPro:Myb-like_dom | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS50090 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF716 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002969CB9 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:16431357..16433137
Molecular Weight (calculated)
37120.8 Da
IEP (calculated)
5.706
GRAVY (calculated)
-0.601
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MARSPSCEKI NVKRGLWTTE EDTKKLAFGS KHGSGLKRCG RSCRIRWTNY PRPDLKDDNF TTQEEDLIIK LHAAIGSRWS IIAQQLPGRT DTDVKNYWNS
101: KLKKKLSQLG IDPVTHKPFS KLIADYGNIG GCQKPSTRIA SINKDFKNAM MLKSESHQTL PEGFITNIND QPKPPPKMET TGNNFLFNRT HGDDLSMNLD
201: QFQAISMKSG ASNCIDFENE IMPVSMFGED CFSKTSSPST PSTCSTTAFS WNDFLLEDAF TPLANQEQDL VSQIEDLTWN KIEVKSLQAS GSDLQFSSAS
301: DISFMEAMLD QENEMFLSFP HLMEEPSKLN
101: KLKKKLSQLG IDPVTHKPFS KLIADYGNIG GCQKPSTRIA SINKDFKNAM MLKSESHQTL PEGFITNIND QPKPPPKMET TGNNFLFNRT HGDDLSMNLD
201: QFQAISMKSG ASNCIDFENE IMPVSMFGED CFSKTSSPST PSTCSTTAFS WNDFLLEDAF TPLANQEQDL VSQIEDLTWN KIEVKSLQAS GSDLQFSSAS
301: DISFMEAMLD QENEMFLSFP HLMEEPSKLN
001: MGRPPCCDKS NVKKGLWTEE EDAKILAYVA IHGVGNWSLI PKKAGLNRCG KSCRLRWTNY LRPDLKHDSF STQEEELIIE CHRAIGSRWS SIARKLPGRT
101: DNDVKNHWNT KLKKKLMKMG IDPVTHKPVS QLLAEFRNIS GHGNASFKTE PSNNSILTQS NSAWEMMRNT TTNHESYYTN SPMMFTNSSE YQTTPFHFYS
201: HPNHLLNGTT SSCSSSSSST SITQPNQVPQ TPVTNFYWSD FLLSDPVPQV VGSSATSDLT FTQNEHHFNI EAEYISQNID SKASGTCHSA SSFVDEILDK
301: DQEMLSQFPQ LLNDFDY
101: DNDVKNHWNT KLKKKLMKMG IDPVTHKPVS QLLAEFRNIS GHGNASFKTE PSNNSILTQS NSAWEMMRNT TTNHESYYTN SPMMFTNSSE YQTTPFHFYS
201: HPNHLLNGTT SSCSSSSSST SITQPNQVPQ TPVTNFYWSD FLLSDPVPQV VGSSATSDLT FTQNEHHFNI EAEYISQNID SKASGTCHSA SSFVDEILDK
301: DQEMLSQFPQ LLNDFDY
Arabidopsis Description
MYB35Transcription factor MYB35 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.