Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18986 | Soybean | nucleus | 92.6 | 93.37 |
| Zm00001d018319_P001 | Maize | nucleus | 21.64 | 87.78 |
| PGSC0003DMT400048261 | Potato | nucleus | 57.81 | 57.34 |
| Bra006811.1-P | Field mustard | nucleus | 49.86 | 54.98 |
| CDX88631 | Canola | nucleus | 49.86 | 54.98 |
| CDY11860 | Canola | nucleus | 50.14 | 54.79 |
| AT5G57620.1 | Thale cress | nucleus | 49.86 | 54.65 |
| CDY25898 | Canola | nucleus | 48.49 | 54.63 |
| Bra020428.1-P | Field mustard | nucleus | 49.32 | 54.22 |
| Solyc07g006750.2.1 | Tomato | mitochondrion | 58.36 | 50.24 |
| VIT_11s0052g01490.t01 | Wine grape | nucleus | 47.12 | 47.12 |
| KRH49024 | Soybean | nucleus | 30.14 | 42.31 |
| KRH74186 | Soybean | nucleus | 30.14 | 42.15 |
| KRH60169 | Soybean | nucleus | 27.95 | 41.13 |
| KRH04372 | Soybean | nucleus | 36.99 | 39.82 |
| KRH58168 | Soybean | nucleus | 35.89 | 39.1 |
| KRH19894 | Soybean | nucleus | 32.33 | 38.69 |
| KRH77168 | Soybean | nucleus | 36.44 | 38.33 |
| KRH28317 | Soybean | nucleus | 36.44 | 38.22 |
| KRH61462 | Soybean | nucleus | 36.44 | 38.0 |
| KRH25089 | Soybean | nucleus | 32.33 | 37.46 |
| TraesCS6B01G377400.1 | Wheat | nucleus | 37.26 | 37.36 |
| TraesCS6A01G344700.1 | Wheat | nucleus | 37.26 | 37.26 |
| TraesCS6D01G327300.1 | Wheat | nucleus | 37.26 | 37.26 |
| HORVU6Hr1G083250.1 | Barley | nucleus | 36.99 | 37.19 |
| KRH15488 | Soybean | nucleus | 30.68 | 37.09 |
| KRH52158 | Soybean | nucleus | 35.89 | 36.9 |
| KRH32503 | Soybean | nucleus | 32.05 | 36.56 |
| KRH41459 | Soybean | nucleus | 19.73 | 36.36 |
| KRH30589 | Soybean | nucleus | 32.6 | 36.17 |
| KRH05529 | Soybean | nucleus | 30.14 | 35.6 |
| KRH15479 | Soybean | nucleus | 35.34 | 35.44 |
| KRG88657 | Soybean | nucleus | 35.62 | 35.23 |
| KRH67733 | Soybean | nucleus | 30.96 | 35.09 |
| KRG96025 | Soybean | nucleus | 31.51 | 34.85 |
| Zm00001d052069_P001 | Maize | nucleus | 36.99 | 34.09 |
| KRH26521 | Soybean | nucleus | 31.23 | 33.53 |
| EES05913 | Sorghum | nucleus | 36.71 | 33.25 |
| KRH22841 | Soybean | nucleus | 30.96 | 33.24 |
| Os02t0786400-00 | Rice | extracellular | 36.71 | 30.73 |
| KRH63439 | Soybean | nucleus | 20.27 | 27.82 |
| KRG93460 | Soybean | nucleus | 25.75 | 27.25 |
| KRG98401 | Soybean | nucleus | 23.84 | 26.69 |
| KRH46482 | Soybean | nucleus | 23.29 | 26.15 |
| KRH18536 | Soybean | endoplasmic reticulum | 25.75 | 25.07 |
| KRH54481 | Soybean | nucleus | 21.1 | 23.33 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100783440 | MapMan:15.5.2.1 | EMBL:ACUP02010329 | EnsemblPlantsGene:GLYMA_17G065800 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | UniProt:I1MST6 | InterPro:IPR017930 | EnsemblPlants:KRH02902 | ProteinID:KRH02902 |
| ProteinID:KRH02902.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF891 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000295131E | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr17:+:5082198..5084006
Molecular Weight (calculated)
41004.9 Da
IEP (calculated)
6.848
GRAVY (calculated)
-0.761
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKN NVKKGPWSPE EDATLKTYIE KNGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FTEEEDNIIC SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TRLKKKLLGR RKQSNFSSKD TNNGIEENSY SNALSTSALE RLQLHMQLQS LQNPFSFYNN PALWPKLHPI QEKMIHSLQS LNDGSNPVMQ
201: NALPNSPHDE QGQKGEFYKP QHDGAKINNP DQVHLLENIP LSNSGVPFVA SGSSTNPMHS SLAPRSEAIH VQTNNNVGFQ QLGALQNELD EILNNRTMGY
301: VPQEDHDMAS GFDCFREMND SKDSLIWWSN DSDTKSASSN SWESSATPAL LTQGMFQDYE LGYSL
101: TDNDIKNYWN TRLKKKLLGR RKQSNFSSKD TNNGIEENSY SNALSTSALE RLQLHMQLQS LQNPFSFYNN PALWPKLHPI QEKMIHSLQS LNDGSNPVMQ
201: NALPNSPHDE QGQKGEFYKP QHDGAKINNP DQVHLLENIP LSNSGVPFVA SGSSTNPMHS SLAPRSEAIH VQTNNNVGFQ QLGALQNELD EILNNRTMGY
301: VPQEDHDMAS GFDCFREMND SKDSLIWWSN DSDTKSASSN SWESSATPAL LTQGMFQDYE LGYSL
001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
Arabidopsis Description
MYB36Transcription factor MYB36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.