Factsheet for Solyc07g006750.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400048261	Potato	nucleus	83.25	95.92
Zm00001d018319_P001	Maize	nucleus	19.1	90.0
KRH18986	Soybean	nucleus	50.71	59.39
KRH02902	Soybean	nucleus	50.24	58.36
Solyc08g065910.1.1	Tomato	nucleus	21.93	43.66
Solyc04g077260.2.1	Tomato	nucleus	30.42	39.69
Solyc09g008250.2.1	Tomato	nucleus	27.59	39.53
HORVU6Hr1G083250.1	Barley	nucleus	33.73	39.39
TraesCS6B01G377400.1	Wheat	nucleus	33.73	39.29
TraesCS6D01G327300.1	Wheat	nucleus	33.49	38.9
TraesCS6A01G344700.1	Wheat	nucleus	33.49	38.9
Solyc02g091980.1.1	Tomato	nucleus	29.25	37.58
Solyc12g008670.1.1	Tomato	nucleus	24.76	37.23
Solyc11g069030.1.1	Tomato	nucleus	26.65	35.87
Zm00001d052069_P001	Maize	nucleus	33.49	35.86
EES05913	Sorghum	nucleus	33.96	35.73
Solyc06g074910.2.1	Tomato	nucleus	25.24	35.43
Solyc03g059200.1.1	Tomato	nucleus	21.7	34.98
Os02t0786400-00	Rice	extracellular	34.91	33.95
Solyc06g074920.1.1	Tomato	nucleus	23.11	33.22
Solyc10g005760.1.1	Tomato	nucleus	20.99	26.49
Solyc03g113530.2.1	Tomato	nucleus	17.92	21.41

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
UniProt:K4CBE6	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF946
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	EnsemblPlantsGene:Solyc07g006750.2	EnsemblPlants:Solyc07g006750.2.1	UniParc:UPI000276C7AC
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:1589096..1591496

Molecular Weight (calculated)

48459.6 Da

IEP (calculated)

9.465

GRAVY (calculated)

-0.700

Length

424 amino acids

Sequence
(BLAST)

001: MRRLFWFFKS MTSLIIHSFS TYKIKSSLLK IFQINNYHKI FQSIKKKKFG SNKKFKKNMG RAPCCDKANV KKGPWSPEED ATLKAYIEEN GTGNNWIALP
101: QKIGLKRCGK SCRLRWLNYL RPNIKHGGFT EEEDNIICSL YISIGSRWSI IAAQLPGRTD NDIKNYWNTR LKKKLLGKRK QSQMNRLLLA NGGQDLKDIN
201: GLEENPLLQN LSNSALERLQ LHMQLQTLQN PLSFYNNPSL WPKLTPLQQK MIQTLQSNGL NENQSPLYTP INPSENHAHE LGQKVGINEF ASTKVNVEVE
301: KSIPINDFNN NQKNVLDTNI GQENAKEIQI QGVQGFTQLE IDDLILNNKG SIGLNMHSEN QQIGSEFDCF KEMDDGSRDN LAWWSNDFDT NTASSSNSWG
401: SSSNILQNSH EGMYQDYALG YNLQ

Best Arabidopsis Sequence Match ( AT5G57620.1 )
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV

Arabidopsis Description

MYB36Transcription factor MYB36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.