Factsheet for PGSC0003DMT400048261

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018319_P001	Maize	nucleus	22.01	90.0
Solyc07g006750.2.1	Tomato	mitochondrion	95.92	83.25
KRH18986	Soybean	nucleus	57.61	58.56
KRH02902	Soybean	nucleus	57.34	57.81
PGSC0003DMT400009926	Potato	nucleus	32.61	40.0
PGSC0003DMT400005085	Potato	nucleus	32.34	39.67
PGSC0003DMT400012702	Potato	nucleus	35.33	39.51
HORVU6Hr1G083250.1	Barley	nucleus	38.32	38.84
TraesCS6B01G377400.1	Wheat	nucleus	38.04	38.46
TraesCS6D01G327300.1	Wheat	nucleus	38.04	38.36
TraesCS6A01G344700.1	Wheat	nucleus	38.04	38.36
PGSC0003DMT400000932	Potato	nucleus	29.89	38.06
PGSC0003DMT400055148	Potato	nucleus	33.7	37.58
Zm00001d052069_P001	Maize	nucleus	38.04	35.35
EES05913	Sorghum	nucleus	38.59	35.24
PGSC0003DMT400035941	Potato	nucleus	17.39	34.97
Os02t0786400-00	Rice	extracellular	38.59	32.57
PGSC0003DMT400022009	Potato	nucleus	25.27	31.74
PGSC0003DMT400022402	Potato	nucleus	24.46	27.44
PGSC0003DMT400020979	Potato	nucleus	13.04	24.12
PGSC0003DMT400062839	Potato	nucleus	16.03	19.22

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:102587150	MapMan:15.5.2.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M1BM59	InterPro:Myb_dom	PFAM:PF00249
EnsemblPlantsGene:PGSC0003DMG400018750	PGSC:PGSC0003DMG400018750	EnsemblPlants:PGSC0003DMT400048261	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF946
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0002968329	RefSeq:XP_006366205.1	SEG:seg

Description

MYB transcription factor MYB64 [Source:PGSC_GENE;Acc:PGSC0003DMG400018750]

Coordinates

chr7:-:2484435..2486834

Molecular Weight (calculated)

41810.1 Da

IEP (calculated)

6.780

GRAVY (calculated)

-0.811

Length

368 amino acids

Sequence
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDATLKAYIE ENGTGNNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FTEEEDNIIC SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TRLKKKLLGK RKQSQMNRLL LANGGQDLKD INGLEENPLL QNLSNSALER LQLHMQLQTL QNPLSFYNNP SLWPKLTPLQ QKMIQTLQAN
201: GLNENQSPLY TPINPSENHP HELRQKVGIN EFASTNFKMN DQVEKSSTIN DFNNNQKNVL DTNIGQENKK EVQIQGIQGF TQLEIDNLIL NNKGSIGLNM
301: HSENQQIGSE FDCFKEMDDG SRDNMAWWSN DFDTNTASSS NSWGSSSNIL QNSHEGMYQD YALGYNLQ

Best Arabidopsis Sequence Match ( AT5G57620.1 )
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV

Arabidopsis Description

MYB36Transcription factor MYB36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.