Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018319_P001 | Maize | nucleus | 21.72 | 95.56 |
| EES05913 | Sorghum | nucleus | 81.82 | 80.4 |
| TraesCS6B01G377400.1 | Wheat | nucleus | 62.12 | 67.58 |
| HORVU6Hr1G083250.1 | Barley | nucleus | 61.62 | 67.22 |
| TraesCS6A01G344700.1 | Wheat | nucleus | 61.87 | 67.12 |
| TraesCS6D01G327300.1 | Wheat | nucleus | 61.62 | 66.85 |
| Zm00001d050185_P002 | Maize | nucleus | 36.62 | 43.41 |
| Os02t0786400-00 | Rice | extracellular | 47.73 | 43.35 |
| VIT_11s0052g01490.t01 | Wine grape | nucleus | 39.39 | 42.74 |
| Zm00001d038930_P001 | Maize | nucleus | 28.03 | 42.37 |
| Zm00001d034207_P001 | Maize | nucleus | 32.07 | 40.45 |
| CDY11860 | Canola | nucleus | 33.08 | 39.22 |
| CDY25898 | Canola | nucleus | 32.07 | 39.2 |
| AT5G57620.1 | Thale cress | nucleus | 32.83 | 39.04 |
| Bra006811.1-P | Field mustard | nucleus | 32.58 | 38.97 |
| CDX88631 | Canola | nucleus | 32.58 | 38.97 |
| Zm00001d020569_P001 | Maize | nucleus | 36.11 | 38.75 |
| Zm00001d039496_P001 | Maize | nucleus | 24.24 | 38.4 |
| Bra020428.1-P | Field mustard | nucleus | 32.07 | 38.25 |
| KRH18986 | Soybean | nucleus | 34.85 | 38.12 |
| PGSC0003DMT400048261 | Potato | nucleus | 35.35 | 38.04 |
| Zm00001d005307_P001 | Maize | nucleus | 28.28 | 37.97 |
| Zm00001d043837_P001 | Maize | nucleus | 30.3 | 37.5 |
| Zm00001d005784_P001 | Maize | nucleus | 32.58 | 37.28 |
| KRH02902 | Soybean | nucleus | 34.09 | 36.99 |
| Zm00001d013164_P002 | Maize | nucleus | 32.58 | 36.86 |
| Zm00001d004126_P001 | Maize | nucleus | 32.58 | 35.83 |
| Zm00001d011614_P001 | Maize | nucleus | 29.29 | 35.58 |
| Solyc07g006750.2.1 | Tomato | mitochondrion | 35.86 | 33.49 |
| Zm00001d028777_P001 | Maize | nucleus | 26.26 | 32.6 |
| Zm00001d011739_P001 | Maize | nucleus | 22.22 | 30.34 |
| Zm00001d043611_P001 | Maize | nucleus | 22.73 | 28.48 |
| Zm00001d013931_P001 | Maize | nucleus | 19.19 | 27.84 |
| Zm00001d025664_P001 | Maize | nucleus | 22.22 | 24.72 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103654188 | MapMan:15.5.2.1 | ProteinID:AQK55959.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7U1L5 | InterPro:Myb_dom |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF654 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002212CED | EnsemblPlantsGene:Zm00001d052069 | EnsemblPlants:Zm00001d052069_P001 | EnsemblPlants:Zm00001d052069_T001 | SEG:seg |
Description
MYB-transcription factor 16Putative MYB DNA-binding domain superfamily protein
Coordinates
chr4:-:178364585..178366789
Molecular Weight (calculated)
41690.9 Da
IEP (calculated)
6.944
GRAVY (calculated)
-0.287
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKA SVKKGPWSPD EDAKLKAYIE EHGTGGNWIA LPHKIGLKRC GKSCRLRWLN YLRPNIKHGD FTEEEEHIIC SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGK RAPSRRARTN QDPCYLAAGA ASSSSSSSAA TATQALSASA LERIQLHMRL QGIYGALACS GGNDDSNAAF GSAAAAPPQW
201: PKLEALSQAN RLLPGSLPAD AMATTVSVQP HPQHLVEVDH HQSLAAAALE GEQQLSSAGE GGFFERPKVD FYSPSAEVAA AAAASVEMNS VAPMVVGGYA
301: GAAGFGPQHH HDELYDFLYS KYGSVGGLAH DGGHVPTLPE LQCPDGAAAV VGADEKFSAW TAAACDYGAA AGGHQIQGNS IVGSSLHDYV LGGYGQ
101: TDNDIKNYWN TKLKKKLLGK RAPSRRARTN QDPCYLAAGA ASSSSSSSAA TATQALSASA LERIQLHMRL QGIYGALACS GGNDDSNAAF GSAAAAPPQW
201: PKLEALSQAN RLLPGSLPAD AMATTVSVQP HPQHLVEVDH HQSLAAAALE GEQQLSSAGE GGFFERPKVD FYSPSAEVAA AAAASVEMNS VAPMVVGGYA
301: GAAGFGPQHH HDELYDFLYS KYGSVGGLAH DGGHVPTLPE LQCPDGAAAV VGADEKFSAW TAAACDYGAA AGGHQIQGNS IVGSSLHDYV LGGYGQ
001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
Arabidopsis Description
MYB36Transcription factor MYB36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.