Factsheet for Zm00001d005784_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98942	Sorghum	nucleus	87.86	82.38
Zm00001d020569_P001	Maize	nucleus	85.26	79.95
Zm00001d018319_P001	Maize	nucleus	20.52	78.89
TraesCS5B01G216900.1	Wheat	nucleus	53.18	59.93
TraesCS5A01G217900.1	Wheat	nucleus	53.47	59.87
HORVU5Hr1G063410.1	Barley	nucleus	52.02	59.8
TraesCS5D01G225800.1	Wheat	nucleus	52.89	57.91
Os09t0431300-00	Rice	nucleus	58.67	45.62
Zm00001d050185_P002	Maize	nucleus	40.46	41.92
Zm00001d038930_P001	Maize	nucleus	29.77	39.31
Zm00001d039496_P001	Maize	nucleus	27.75	38.4
VIT_11s0052g01490.t01	Wine grape	nucleus	37.86	35.89
Zm00001d034207_P001	Maize	nucleus	31.79	35.03
GSMUA_Achr7P19530_001	Banana	nucleus	34.39	34.9
CDX88631	Canola	nucleus	32.66	34.14
Bra006811.1-P	Field mustard	nucleus	32.66	34.14
CDY11860	Canola	nucleus	32.95	34.13
Bra020428.1-P	Field mustard	nucleus	32.66	34.04
CDY25898	Canola	nucleus	31.79	33.95
AT5G57620.1	Thale cress	nucleus	32.66	33.93
Zm00001d005307_P001	Maize	nucleus	28.9	33.9
Zm00001d043837_P001	Maize	nucleus	30.92	33.44
Zm00001d052069_P001	Maize	nucleus	37.28	32.58
Zm00001d004126_P001	Maize	nucleus	32.95	31.67
Zm00001d011614_P001	Maize	nucleus	29.77	31.6
Zm00001d013164_P002	Maize	nucleus	31.5	31.14
Zm00001d011739_P001	Maize	nucleus	24.86	29.66
Zm00001d013931_P001	Maize	nucleus	22.25	28.21
Zm00001d043611_P001	Maize	nucleus	25.14	27.53
Zm00001d028777_P001	Maize	nucleus	24.28	26.33
Zm00001d025664_P001	Maize	nucleus	23.12	22.47

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:103647446	MapMan:15.5.2.1	UniProt:A0A1D6EQQ2	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	ProteinID:ONM22088.1
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF946	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI00022201C5	EnsemblPlantsGene:Zm00001d005784	EnsemblPlants:Zm00001d005784_P001	EnsemblPlants:Zm00001d005784_T001	SEG:seg

Description

MYB-transcription factor 111Transcription factor MYB36

Coordinates

chr2:-:188225506..188227001

Molecular Weight (calculated)

37703.2 Da

IEP (calculated)

7.826

GRAVY (calculated)

-0.525

Length

346 amino acids

Sequence
(BLAST)

001: MGRALCCDKA TVKKGPWAPE EDAVLKGHID EHGAGGNWIQ LPHKIGLNRC GKSCRLRWLN YLRPNIRHGG FTEDEDRLIC SLYISIGSRW ATIAAQLPGR
101: TDNDVKNHWN TKLKRRLLGG GGRRPRAEAR LQLLTNPTWQ HNSFASSALE RLHVSMRLHR RHQARLDDNP PPAAFTLYNY DSLAAPLWPS LAPSSSPSPA
201: ASESSEMLPR QQPPAGATPT AGYSAGLWWT HMPGSYSFGY AGGRVQENVD GTCTPPLSTS TRDTMTAVGV ESSSSTPTAS SASATFESSM DDEIDMLLRQ
301: IQCFGESGRH IGDEVAVDGI DHCFRAVDRH ETANGSVGSW SGFGVP

Best Arabidopsis Sequence Match ( AT2G36890.1 )
(BLAST)

001: MGRAPCCDKA NVKRGPWSPE EDAKLKDYIE KQGTGGNWIA LPHKAGLRRC GKSCRLRWLN YLRPNIRHGD FTEEEDNIIY SLFASIGSRW SVIAAHLQGR
101: TDNDIKNYWN TKLKKKLIAT MAPPPHHHLA IATSSSSASP SSSSHYNMIN SLLPYNPSTN QLLTPHQGIM MTMMGQQQQL FYQEDMGNLV NSPNRNNLIM
201: SHQEDNQEQS TNKGIMLLSD VRSGSSTTST VTRVKMEHRD HDDHHHHHEE DERSMTSVVM EDYGMEEIKQ LISSSCTSSN NSLWFDENKT EDKFMLYY

Arabidopsis Description

RAX2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT2G36890]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.