Factsheet for Zm00001d011739_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043611_P001	Maize	nucleus	73.45	67.41
Zm00001d018319_P001	Maize	nucleus	20.34	65.56
EES01384	Sorghum	nucleus	69.31	63.21
HORVU3Hr1G068550.1	Barley	nucleus	46.21	61.47
TraesCS5D01G242200.1	Wheat	nucleus	38.28	58.73
HORVU4Hr1G087730.1	Barley	nucleus	42.41	56.42
TraesCS3D01G286300.1	Wheat	nucleus	54.48	54.67
TraesCS3A01G286600.1	Wheat	nucleus	54.83	54.64
Os01t0722300-01	Rice	nucleus	55.86	54.36
TraesCS4B01G366600.1	Wheat	nucleus	48.97	52.59
TraesCS4D01G360600.1	Wheat	nucleus	48.28	52.43
TraesCS5A01G534400.1	Wheat	nucleus	48.28	52.24
TraesCS3B01G320800.1	Wheat	nucleus, plastid	53.1	42.08
Zm00001d039496_P001	Maize	nucleus	33.79	39.2
Zm00001d038930_P001	Maize	nucleus	33.1	36.64
Zm00001d043837_P001	Maize	nucleus	35.17	31.88
Zm00001d005307_P001	Maize	nucleus	31.03	30.51
Zm00001d011614_P001	Maize	nucleus	34.14	30.37
Zm00001d034207_P001	Maize	nucleus	31.03	28.66
Zm00001d028777_P001	Maize	nucleus	29.66	26.96
Zm00001d050185_P002	Maize	nucleus	30.69	26.65
Zm00001d004126_P001	Maize	nucleus	31.72	25.56
Zm00001d013164_P002	Maize	nucleus	30.0	24.86
Zm00001d005784_P001	Maize	nucleus	29.66	24.86
Zm00001d013931_P001	Maize	nucleus	22.76	24.18
Zm00001d020569_P001	Maize	nucleus	29.66	23.31
Zm00001d025664_P001	Maize	nucleus	28.28	23.03
Zm00001d052069_P001	Maize	nucleus	30.34	22.22
CDY40299	Canola	nucleus	3.45	5.0

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:103637431	MapMan:15.5.2.1	ProteinID:AQK97883.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7VL26	InterPro:Myb_dom
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF566	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI000221BF4B	EnsemblPlantsGene:Zm00001d011739	EnsemblPlants:Zm00001d011739_P001	EnsemblPlants:Zm00001d011739_T001	SEG:seg

Description

MYB-transcription factor 114Putative MYB DNA-binding domain superfamily protein

Coordinates

chr8:+:160432796..160433990

Molecular Weight (calculated)

31356.6 Da

IEP (calculated)

7.339

GRAVY (calculated)

-0.512

Length

290 amino acids

Sequence
(BLAST)

001: MGRSPCCDKT RVKRGPWSQE EDAVLRSFVQ RFGNAGNWIA LPQRAGLKRC GKSCRLRWLN YLRPELRHGG FTDEEDRLIL SLYGEIGSKW SVMASRLPGR
101: TDNDVKNYWN TKLKKRYLAS SSTSTTQGRS PPPPSPPPAP APPSGDNSSN AAAAADIHHT HQDEKPCLPP TPPALTEFDT TFADDTLLFK SEQLYAELVG
201: LIGKQSSSTG DRDEASTPSS SSSAARPRRL AAQVAALCGP WTVDVRDTAA LLSEPTTALL DAYGAADDAF GPALSACSFQ DLLASSYVDL

Best Arabidopsis Sequence Match ( AT2G36890.1 )
(BLAST)

001: MGRAPCCDKA NVKRGPWSPE EDAKLKDYIE KQGTGGNWIA LPHKAGLRRC GKSCRLRWLN YLRPNIRHGD FTEEEDNIIY SLFASIGSRW SVIAAHLQGR
101: TDNDIKNYWN TKLKKKLIAT MAPPPHHHLA IATSSSSASP SSSSHYNMIN SLLPYNPSTN QLLTPHQGIM MTMMGQQQQL FYQEDMGNLV NSPNRNNLIM
201: SHQEDNQEQS TNKGIMLLSD VRSGSSTTST VTRVKMEHRD HDDHHHHHEE DERSMTSVVM EDYGMEEIKQ LISSSCTSSN NSLWFDENKT EDKFMLYY

Arabidopsis Description

RAX2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT2G36890]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.