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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G534400.1 Wheat nucleus 92.13 91.79
TraesCS4B01G366600.1 Wheat nucleus 91.39 90.37
HORVU4Hr1G087730.1 Barley nucleus 73.78 90.37
TraesCS5D01G242200.1 Wheat nucleus 50.56 71.43
TraesCS3D01G286300.1 Wheat nucleus 67.79 62.63
Os01t0722300-01 Rice nucleus 59.18 53.02
Zm00001d043611_P001 Maize nucleus 57.3 48.42
Zm00001d011739_P001 Maize nucleus 52.43 48.28
EES01384 Sorghum nucleus 57.3 48.11
TraesCS3D01G109800.1 Wheat nucleus 35.58 35.58
TraesCS1D01G387100.1 Wheat nucleus 37.45 32.47
TraesCS7D01G407500.1 Wheat nucleus 31.09 31.32
TraesCS1D01G252300.1 Wheat nucleus 22.85 30.05
TraesCS3D01G265100.1 Wheat nucleus 32.21 28.57
TraesCS5D01G225800.1 Wheat nucleus 33.71 28.48
TraesCS5D01G415800.1 Wheat nucleus 32.96 28.3
TraesCS4D01G192400.1 Wheat nucleus 31.46 27.27
TraesCS6D01G327300.1 Wheat nucleus 33.71 24.66
TraesCS2D01G068000.1 Wheat nucleus 32.21 24.64
TraesCS1D01G204500.1 Wheat nucleus 22.85 24.5
TraesCS2D01G331700.1 Wheat nucleus 28.46 21.59
CDY40299 Canola nucleus 6.74 9.0
Protein Annotations
EnsemblPlants:TraesCS4D01G360600.1EnsemblPlantsGene:TraesCS4D01G360600Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:Homeobox-like_sfInterPro:IPR017877InterPro:IPR017930InterPro:Myb-like_domInterPro:Myb_dom
InterPro:SANT/MybPANTHER:PTHR10641PANTHER:PTHR10641:SF566PFAM:PF00249PFscan:PS50090PFscan:PS51294
SEG:segSMART:SM00717SUPFAM:SSF46689TIGR:cd00167MapMan:15.5.2.1:
Description
No Description!
Coordinates
chr4D:+:507559405..507560809
Molecular Weight (calculated)
28865.6 Da
IEP (calculated)
5.346
GRAVY (calculated)
-0.443
Length
267 amino acids
Sequence
(BLAST)
001: MGRSPCCDRR TVKRGAWSRE EDAILTVFVQ RFANAGNWMT LPHKAGLNRC GKSCRLRWLN YLRPALRHGR FTDEEDSLIL SLYADIGSKW SVIAAKLPGR
101: TDNDVKNHWN TKLKKRHLLA MAPSPTPPTA ATDSPSASDS DESSLPPPPL DEAAVATVDH GGELTHRSEE LYAELMGLIQ QQPTNGDVRS SSSSSLPSTP
201: TAGASSAGVT SAGWPVDDKE FLPESSGSSM VVDLDDPCAA HAFGATTFQD LASSYDEIIG TEGLLYY
Best Arabidopsis Sequence Match ( AT2G36890.1 )
(BLAST)
001: MGRAPCCDKA NVKRGPWSPE EDAKLKDYIE KQGTGGNWIA LPHKAGLRRC GKSCRLRWLN YLRPNIRHGD FTEEEDNIIY SLFASIGSRW SVIAAHLQGR
101: TDNDIKNYWN TKLKKKLIAT MAPPPHHHLA IATSSSSASP SSSSHYNMIN SLLPYNPSTN QLLTPHQGIM MTMMGQQQQL FYQEDMGNLV NSPNRNNLIM
201: SHQEDNQEQS TNKGIMLLSD VRSGSSTTST VTRVKMEHRD HDDHHHHHEE DERSMTSVVM EDYGMEEIKQ LISSSCTSSN NSLWFDENKT EDKFMLYY
Arabidopsis Description
RAX2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT2G36890]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.