Factsheet for TraesCS3D01G265100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G264900.1	Wheat	nucleus	29.24	98.88
TraesCS3B01G298200.1	Wheat	nucleus	97.67	98.0
Zm00001d043837_P001	Maize	nucleus	65.78	61.88
OQU87345	Sorghum	nucleus	66.45	60.06
Zm00001d011614_P001	Maize	nucleus	64.78	59.82
Os01t0685400-01	Rice	nucleus	44.85	57.69
GSMUA_Achr5P09280_001	Banana	nucleus	32.89	51.56
TraesCS5D01G242200.1	Wheat	nucleus	28.24	44.97
HORVU3Hr1G063460.4	Barley	nucleus	41.53	40.19
TraesCS3D01G109800.1	Wheat	nucleus	33.22	37.45
TraesCS1D01G387100.1	Wheat	nucleus	38.21	37.34
TraesCS7D01G407500.1	Wheat	nucleus	31.23	35.47
TraesCS1D01G252300.1	Wheat	nucleus	23.26	34.48
TraesCS3D01G286300.1	Wheat	nucleus	31.89	33.22
TraesCS5D01G415800.1	Wheat	nucleus	33.55	32.48
TraesCS4D01G360600.1	Wheat	nucleus	28.57	32.21
TraesCS5D01G225800.1	Wheat	nucleus	33.55	31.96
TraesCS2D01G068000.1	Wheat	nucleus	36.54	31.52
TraesCS6D01G327300.1	Wheat	nucleus	36.54	30.14
TraesCS4D01G192400.1	Wheat	nucleus	27.57	26.95
TraesCS1D01G204500.1	Wheat	nucleus	20.93	25.3
TraesCS2D01G331700.1	Wheat	nucleus	28.57	24.43

Protein Annotations

EnsemblPlants:TraesCS3D01G265100.1	EnsemblPlantsGene:TraesCS3D01G265100	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF694	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
TIGR:cd00167	MapMan:15.5.2.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:367235513..367237141

Molecular Weight (calculated)

32185.8 Da

IEP (calculated)

8.037

GRAVY (calculated)

-0.389

Length

301 amino acids

Sequence
(BLAST)

001: MGRAPCCDKA SVKRGPWSPE EDELLRSYVR SHGAVGNWIA LPQKAGLNRC GKSCRLRWLN YLRPDIKHGG YTEQEDMVIC SLYNSIGSRW SIIASKLPGR
101: TDNDVKNYWN TKLKKKAMAM HHHQQQHYHH HGTAGRGHAG GATIATPPPA PQSQCASYMQ PSPASASSAV TTASGDAGSF GAMYSPSHQA APLGHYNVNT
201: AAPLAEFSAM PTPAAANSWA INMAFEDMFL PELVGGGDFS QADLFGGFGA SLLQAQDSRA QSSLQELSAC YFPNAQAEMW AAAADHVNVK PPGAGLCPSL
301: T

Best Arabidopsis Sequence Match ( AT2G36890.1 )
(BLAST)

001: MGRAPCCDKA NVKRGPWSPE EDAKLKDYIE KQGTGGNWIA LPHKAGLRRC GKSCRLRWLN YLRPNIRHGD FTEEEDNIIY SLFASIGSRW SVIAAHLQGR
101: TDNDIKNYWN TKLKKKLIAT MAPPPHHHLA IATSSSSASP SSSSHYNMIN SLLPYNPSTN QLLTPHQGIM MTMMGQQQQL FYQEDMGNLV NSPNRNNLIM
201: SHQEDNQEQS TNKGIMLLSD VRSGSSTTST VTRVKMEHRD HDDHHHHHEE DERSMTSVVM EDYGMEEIKQ LISSSCTSSN NSLWFDENKT EDKFMLYY

Arabidopsis Description

RAX2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT2G36890]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.