Factsheet for Os01t0685400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G265100.1	Wheat	nucleus	57.69	44.85
TraesCS3B01G298200.1	Wheat	nucleus	56.84	44.33
Zm00001d043837_P001	Maize	nucleus	55.98	40.94
OQU87345	Sorghum	nucleus	57.27	40.24
Zm00001d011614_P001	Maize	nucleus	53.42	38.34
Os05t0553400-01	Rice	nucleus	43.59	35.29
GSMUA_Achr5P09280_001	Banana	nucleus	15.38	18.75
Os08t0248700-01	Rice	nucleus	18.38	13.61
Os01t0191900-01	Rice	nucleus	14.96	13.26
Os01t0722300-01	Rice	nucleus	16.24	12.75
HORVU3Hr1G063460.4	Barley	nucleus	16.24	12.22
Os03t0771100-01	Rice	nucleus	16.67	12.15
Os02t0786400-00	Rice	extracellular	20.09	10.78
Os09t0431300-00	Rice	nucleus	17.95	9.44
Os03t0296000-00	Rice	nucleus	2.14	4.85
Os12t0633501-00	Rice	mitochondrion	2.14	4.63
TraesCS3A01G264900.1	Wheat	nucleus	1.71	4.49
Os08t0102050-00	Rice	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.2	UniProt:A0A0P0V6Q6	ProteinID:BAS73741.1	GO:GO:0000981	GO:GO:0001135
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212
InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os01g0685400	EnsemblPlants:Os01t0685400-01	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF694	InterPro:SANT/Myb	SUPFAM:SSF46689	UniParc:UPI000393BD60
SEG:seg	:	:	:	:	:

Description

Homeodomain-like domain containing protein. (Os01t0685400-01)

Coordinates

chr1:+:28250506..28251508

Molecular Weight (calculated)

24445.7 Da

IEP (calculated)

7.358

GRAVY (calculated)

-0.265

Length

234 amino acids

Sequence
(BLAST)

001: PTNRRWSIIA SKLPGRTDND VKNYWNTKLK KKAMAMHHHH QPPPPQQQHY HHHHHHRVAG GGARVTLVSP PPAPQSQCAS MQPSPASASS SGGDACSFGA
101: AAMYSPSPST QQAPQAATLA VAGYTSVATA AAAAAVAAQR SPLDELICQV PPPPTTTAAD CWASGVTLDD VFLPELVGAG EFPNGDLFGG FGPLLQDRSS
201: MELSACYFPN AAAAEMWPAA TDIVKPAGLC HSLT

Best Arabidopsis Sequence Match ( AT4G37780.1 )
(BLAST)

001: MGRAPCCDKM AVKKGPWSTE EDAVLKSYIE KHGTGNNWIS LPQRIGIKRC GKSCRLRWLN YLRPNLKHGG FTDEEDYIIC SLYITIGSRW SIIASQLPGR
101: TDNDIKNYWN TRLKKKLLSK QGKAFHQQLN VKFERGTTSS SSSQNQIQIF HDENTKSNQT LYNQVVDPSM RAFAMEEQSM IKNQILEPFS WEPNKVLFDV
201: DYDAAASSYH HHASPSLNSM SSTSSIGTNN SSLQMSHYTV NHNDHDQPDM FFMDGFENFQ AELFDEIANN NTVENGFDGT EILINNNYLD HDISSFIDYP
301: LYDNE

Arabidopsis Description

MYB87Transcription factor MYB87 [Source:UniProtKB/Swiss-Prot;Acc:F4JSU0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.