Factsheet for Os01t0191900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00143	Sorghum	nucleus	62.5	67.35
Zm00001d039496_P001	Maize	nucleus	62.88	66.4
TraesCS3D01G109800.1	Wheat	nucleus	66.67	65.92
TraesCS3A01G108000.1	Wheat	nucleus	65.91	65.17
HORVU3Hr1G019590.2	Barley	nucleus	64.77	63.57
TraesCS3B01G126800.1	Wheat	nucleus	64.77	63.33
Os12t0633501-00	Rice	mitochondrion	14.02	34.26
Os08t0102050-00	Rice	nucleus	6.06	34.04
Os01t0722300-01	Rice	nucleus	37.5	33.22
Os05t0553400-01	Rice	nucleus	35.61	32.53
Os03t0296000-00	Rice	nucleus	11.74	30.1
Os08t0248700-01	Rice	nucleus	34.85	29.11
Os03t0771100-01	Rice	nucleus	33.71	27.73
Os09t0431300-00	Rice	nucleus	36.36	21.57
Os02t0786400-00	Rice	extracellular	33.33	20.18
Os01t0685400-01	Rice	nucleus	13.26	14.96

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4327303	ProteinID:BAA99440.1	ProteinID:BAB12688.1	ProteinID:BAF04189.1
ProteinID:BAS70828.1	ProteinID:EAZ10868.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
InterPro:Myb_dom	EnsemblPlantsGene:Os01g0191900	EnsemblPlants:Os01t0191900-01	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF607	UniProt:Q9LG70	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00000A44F9
RefSeq:XP_015628419.1	RefSeq:XP_015628427.1	SEG:seg	:	:	:

Description

R2R3-MYBSimilar to Blind. (Os01t0191900-01)

Coordinates

chr1:-:4917960..4919224

Molecular Weight (calculated)

27980.7 Da

IEP (calculated)

6.017

GRAVY (calculated)

-0.286

Length

264 amino acids

Sequence
(BLAST)

001: MGRTPCCDRE AVKRGPWSPE EDDALRDYIN RHGTAGNWIS LPNKAGLRRC GKSCRLRWLN YLRPDIRHGA FTDEEDAIIT SLYSKLGSKW STIAAQLERR
101: TDNDVKNHWN TKLKRRLAAA AACTPLLPLP APPPLAATHT SPSSSLLLLP PLAVPTVKTE AYTCDDFLQQ LLPTATAATA LRDPFADGAA TDGGSTSASA
201: ASSGSNWSAD TGVVVVGGGG GGGLFPEFCM SSDDLAGAAT AEDDHFIGGG YYYPLDPSLS SSLV

Best Arabidopsis Sequence Match ( AT2G36890.1 )
(BLAST)

001: MGRAPCCDKA NVKRGPWSPE EDAKLKDYIE KQGTGGNWIA LPHKAGLRRC GKSCRLRWLN YLRPNIRHGD FTEEEDNIIY SLFASIGSRW SVIAAHLQGR
101: TDNDIKNYWN TKLKKKLIAT MAPPPHHHLA IATSSSSASP SSSSHYNMIN SLLPYNPSTN QLLTPHQGIM MTMMGQQQQL FYQEDMGNLV NSPNRNNLIM
201: SHQEDNQEQS TNKGIMLLSD VRSGSSTTST VTRVKMEHRD HDDHHHHHEE DERSMTSVVM EDYGMEEIKQ LISSSCTSSN NSLWFDENKT EDKFMLYY

Arabidopsis Description

RAX2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT2G36890]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.