Factsheet for Os01t0722300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G068550.1	Barley	nucleus	49.33	67.43
TraesCS5D01G242200.1	Wheat	nucleus	42.62	67.2
HORVU4Hr1G087730.1	Barley	nucleus	46.31	63.3
TraesCS3D01G286300.1	Wheat	nucleus	59.73	61.59
TraesCS3A01G286600.1	Wheat	nucleus	58.72	60.14
TraesCS4B01G366600.1	Wheat	nucleus	53.69	59.26
TraesCS4D01G360600.1	Wheat	nucleus	53.02	59.18
TraesCS5A01G534400.1	Wheat	nucleus	52.35	58.21
Zm00001d043611_P001	Maize	nucleus	59.73	56.33
Zm00001d011739_P001	Maize	nucleus	54.36	55.86
EES01384	Sorghum	nucleus	59.4	55.66
Os08t0102050-00	Rice	nucleus	7.72	48.94
TraesCS3B01G320800.1	Wheat	nucleus, plastid	55.7	45.36
Os01t0191900-01	Rice	nucleus	33.22	37.5
Os05t0553400-01	Rice	nucleus	34.23	35.29
Os12t0633501-00	Rice	mitochondrion	12.75	35.19
Os03t0771100-01	Rice	nucleus	33.56	31.15
Os08t0248700-01	Rice	nucleus	31.88	30.06
Os03t0296000-00	Rice	nucleus	9.73	28.16
Os02t0786400-00	Rice	extracellular	31.21	21.33
Os09t0431300-00	Rice	nucleus	30.54	20.45
Os01t0685400-01	Rice	nucleus	12.75	16.24

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4324664	EMBL:AK241370	ProteinID:BAD87052.1	ProteinID:BAD87407.1
ProteinID:BAF06014.1	ProteinID:BAS74094.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
InterPro:Myb_dom	EnsemblPlantsGene:Os01g0722300	EnsemblPlants:Os01t0722300-01	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF566	UniProt:Q5JMA5	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00004C286B
RefSeq:XP_015633951.1	SEG:seg	:	:	:	:

Description

Myb transcription factor domain containing protein. (Os01t0722300-01)

Coordinates

chr1:+:30117114..30118654

Molecular Weight (calculated)

31762.8 Da

IEP (calculated)

4.659

GRAVY (calculated)

-0.427

Length

298 amino acids

Sequence
(BLAST)

001: MGRSPCCDKA SVKRGPWSEE EDAILRSFVE RFGNAGNWIA LPHKAGLKRC GKSCRLRWLN YLRPAIRHGG FTDEEDNLIL SLYGEMGSKW SVIASKLPGR
101: TDNDVKNYWN TKLKKRYLAA AATEATTPPP PAAGDDDNNP TTQASSQPAP PTPPAPLVNL DAAGLDGAVG DNDELLLHKS EQLYAELMGL IEQQQYSTIT
201: AAAVDAATTT TSWSSPSTGT TSPTASSSTD GSSSSSNLPW PAVDVHDSTM MPPLSESSGS SSGLFFGSHA FGSGSFQDLL GSAASFDDVM LSQEMLYY

Best Arabidopsis Sequence Match ( AT2G36890.2 )
(BLAST)

001: MSLSLIITEP ENSFSFPFFS FKKQNKDIST KTLRPRETDR EMGRAPCCDK ANVKRGPWSP EEDAKLKDYI EKQGTGGNWI ALPHKAGLRR CGKSCRLRWL
101: NYLRPNIRHG DFTEEEDNII YSLFASIGSR WSVIAAHLQG RTDNDIKNYW NTKLKKKLIA TMAPPPHHHL AIATSSSSAS PSSSSHYNMI NSLLPYNPST
201: NQLLTPHQGI MMTMMGQQQQ LFYQEDMGNL VNSPNRNNLI MSHQEDNQEQ STNKGIMLLS DVRSGSSTTS TVTRVKMEHR DHDDHHHHHE EDERSMTSVV
301: MEDYGMEEIK QLISSSCTSS NNSLWFDENK TEDKFMLYY

Arabidopsis Description

RAX2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT2G36890]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.