Factsheet for Zm00001d043611_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01384	Sorghum	nucleus	75.0	74.53
Zm00001d011739_P001	Maize	nucleus	67.41	73.45
Zm00001d018319_P001	Maize	nucleus	18.99	66.67
HORVU3Hr1G068550.1	Barley	nucleus	43.04	62.39
HORVU4Hr1G087730.1	Barley	nucleus	41.46	60.09
Os01t0722300-01	Rice	nucleus	56.33	59.73
TraesCS3D01G286300.1	Wheat	nucleus	54.43	59.52
TraesCS5D01G242200.1	Wheat	nucleus	35.13	58.73
TraesCS3A01G286600.1	Wheat	nucleus	53.48	58.08
TraesCS4D01G360600.1	Wheat	nucleus	48.42	57.3
TraesCS4B01G366600.1	Wheat	nucleus	48.73	57.04
TraesCS5A01G534400.1	Wheat	nucleus	48.1	56.72
TraesCS3B01G320800.1	Wheat	nucleus, plastid	50.63	43.72
Zm00001d039496_P001	Maize	nucleus	31.96	40.4
Zm00001d038930_P001	Maize	nucleus	31.96	38.55
Zm00001d043837_P001	Maize	nucleus	31.01	30.62
Zm00001d011614_P001	Maize	nucleus	31.33	30.37
Zm00001d034207_P001	Maize	nucleus	29.43	29.62
Zm00001d005307_P001	Maize	nucleus	27.53	29.49
Zm00001d050185_P002	Maize	nucleus	29.75	28.14
Zm00001d028777_P001	Maize	nucleus	27.22	26.96
Zm00001d013164_P002	Maize	nucleus	29.75	26.86
Zm00001d004126_P001	Maize	nucleus	29.11	25.56
Zm00001d005784_P001	Maize	nucleus	27.53	25.14
Zm00001d013931_P001	Maize	nucleus	21.52	24.91
Zm00001d020569_P001	Maize	nucleus	27.53	23.58
Zm00001d025664_P001	Maize	nucleus	25.63	22.75
Zm00001d052069_P001	Maize	nucleus	28.48	22.73
CDY40299	Canola	nucleus	3.16	5.0

Protein Annotations

EnsemblPlants:Zm00001d043611_P001	EnsemblPlants:Zm00001d043611_T001	EnsemblPlantsGene:Zm00001d043611	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF566	PFAM:PF00249	PFscan:PS51294	ProteinID:ONM38575.1	SEG:seg
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0008457255	UniProt:A0A1D6NDK8	MapMan:15.5.2.1	:

Description

MYB-transcription factor 151R2R3MYB-domain protein

Coordinates

chr3:-:205136822..205138473

Molecular Weight (calculated)

33709.7 Da

IEP (calculated)

4.500

GRAVY (calculated)

-0.501

Length

316 amino acids

Sequence
(BLAST)

001: MGRSPCCDKT KVKRGPWSQE EDAVLRSFVQ RFGNAGNWIA LPQKAGLKRC GKSCRLRWLN YLRPELRHGG FTDEEDSLIL SLYGEIGSKY DAWSVIASRL
101: PGRTDNDVKN YWNTKLKKRY LASSTSTGEA RPPPPPPAPP SASGDDSSAA ADSHQAQQDE PSLPLTPPAF STDLDTTFAV VDDDMLLFKS DQLYAELVGL
201: VEKKSQATAG PSTGGGGDEA NSTATPSSSS YGTGTTNSPT VSSSSGSCAL WPTDVHGTTL LSEPTSSSLF DDAYGVGDDA FGAAALPAYS FQDLLASSYD
301: DATAAVVTQE LMQYYQ

Best Arabidopsis Sequence Match ( AT2G36890.1 )
(BLAST)

001: MGRAPCCDKA NVKRGPWSPE EDAKLKDYIE KQGTGGNWIA LPHKAGLRRC GKSCRLRWLN YLRPNIRHGD FTEEEDNIIY SLFASIGSRW SVIAAHLQGR
101: TDNDIKNYWN TKLKKKLIAT MAPPPHHHLA IATSSSSASP SSSSHYNMIN SLLPYNPSTN QLLTPHQGIM MTMMGQQQQL FYQEDMGNLV NSPNRNNLIM
201: SHQEDNQEQS TNKGIMLLSD VRSGSSTTST VTRVKMEHRD HDDHHHHHEE DERSMTSVVM EDYGMEEIKQ LISSSCTSSN NSLWFDENKT EDKFMLYY

Arabidopsis Description

RAX2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT2G36890]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.