Factsheet for HORVU3Hr1G063460.4

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G264900.1	Wheat	nucleus	27.97	97.75
HORVU4Hr1G055640.1	Barley	cytosol	5.79	41.86
TraesCS3B01G298200.1	Wheat	nucleus	40.19	41.67
TraesCS3D01G265100.1	Wheat	nucleus	40.19	41.53
GSMUA_Achr5P09280_001	Banana	nucleus	25.08	40.62
OQU87345	Sorghum	nucleus	38.91	36.34
Zm00001d043837_P001	Maize	nucleus	36.01	35.0
Zm00001d011614_P001	Maize	nucleus	36.66	34.97
HORVU3Hr1G068550.1	Barley	nucleus	22.19	31.65
HORVU4Hr1G087730.1	Barley	nucleus	19.94	28.44
HORVU7Hr1G096190.1	Barley	nucleus	23.15	27.69
HORVU3Hr1G019590.2	Barley	nucleus	22.83	26.39
HORVU5Hr1G063410.1	Barley	nucleus	24.12	24.92
HORVU5Hr1G098540.1	Barley	nucleus	24.12	24.12
HORVU1Hr1G061220.1	Barley	nucleus	23.47	23.03
HORVU2Hr1G010450.2	Barley	nucleus	24.12	21.37
HORVU6Hr1G083250.1	Barley	nucleus	24.76	21.21
HORVU4Hr1G055680.1	Barley	nucleus	18.33	18.87
HORVU1Hr1G051980.2	Barley	nucleus	14.47	18.22
HORVU2Hr1G081720.2	Barley	nucleus	18.01	17.95
HORVU1Hr1G084170.4	Barley	nucleus	17.68	17.08
HORVU1Hr1G045090.1	Barley	nucleus	16.4	17.0
Os01t0685400-01	Rice	nucleus	12.22	16.24

Protein Annotations

EnsemblPlants:HORVU3Hr1G063460.4	EnsemblPlantsGene:HORVU3Hr1G063460	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF694	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI000B48505D	UniProt:A0A287LBJ9	MapMan:15.5.2.1	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:484556615..484558361

Molecular Weight (calculated)

34246.0 Da

IEP (calculated)

12.307

GRAVY (calculated)

-1.022

Length

311 amino acids

Sequence
(BLAST)

001: MGRAPCCDKA SVKRGPWSPE EDELLRNYVR SHGAVGNWIA LPQKAGLNRC GKSCRLRWLN YLRPDIKHGG YTEQEDMVIC SLYNSIGSRC GRSSRPSFPA
101: GRTTMSRTTG TPSSRRRPWP CTSSSTTTTT TAPPAGDMPA ALRSPRRRPP RRANAHHTCS RRRRPPRPPS PPRAATRGAS APCTPHPTRR LSVTTTSTPR
201: RRSPNSRPCR RRPRPTAGPS TWPSRTCSCP SSSGAATSRR QTCSAGSGRR CCKCRTAGRR PSRSSPLATS PTRRRRCGRP PPTMSSRRAP ACAPASHEKR
301: IKPLMLLHPC R

Best Arabidopsis Sequence Match ( AT5G57620.1 )
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV

Arabidopsis Description

MYB36Transcription factor MYB36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.