Factsheet for TraesCS7D01G407500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G096190.1	Barley	nucleus	91.32	93.08
TraesCS7B01G314200.1	Wheat	nucleus	91.7	91.7
TraesCS7A01G414300.1	Wheat	nucleus	92.45	90.41
Zm00001d005307_P001	Maize	nucleus	48.3	43.39
GSMUA_Achr1P03140_001	Banana	nucleus	40.75	42.52
KXG35154	Sorghum	nucleus	48.68	40.31
TraesCS5D01G242200.1	Wheat	nucleus	28.68	40.21
GSMUA_Achr5P10690_001	Banana	nucleus	41.13	39.07
GSMUA_Achr4P25260_001	Banana	nucleus	38.87	36.92
VIT_06s0061g00470.t01	Wine grape	nucleus	44.15	36.91
TraesCS1D01G252300.1	Wheat	nucleus	27.55	35.96
GSMUA_Achr8P14190_001	Banana	nucleus	40.0	33.87
TraesCS5D01G415800.1	Wheat	nucleus	38.87	33.12
TraesCS5D01G225800.1	Wheat	nucleus	38.87	32.59
TraesCS1D01G387100.1	Wheat	nucleus	37.36	32.14
VIT_08s0007g05030.t01	Wine grape	nucleus	41.13	31.87
TraesCS3D01G109800.1	Wheat	nucleus	32.08	31.84
TraesCS3D01G265100.1	Wheat	nucleus	35.47	31.23
TraesCS4D01G360600.1	Wheat	nucleus	31.32	31.09
TraesCS2D01G068000.1	Wheat	nucleus	40.0	30.37
TraesCS6D01G327300.1	Wheat	nucleus	41.13	29.86
TraesCS3D01G286300.1	Wheat	nucleus	32.45	29.76
TraesCS4D01G192400.1	Wheat	nucleus	32.83	28.25
TraesCS1D01G204500.1	Wheat	nucleus	24.15	25.7
TraesCS2D01G331700.1	Wheat	nucleus	30.94	23.3

Protein Annotations

EnsemblPlants:TraesCS7D01G407500.1	EnsemblPlantsGene:TraesCS7D01G407500	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF654	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
TIGR:cd00167	MapMan:15.5.2.1	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:524915220..524916104

Molecular Weight (calculated)

29141.1 Da

IEP (calculated)

8.228

GRAVY (calculated)

-0.592

Length

265 amino acids

Sequence
(BLAST)

001: MGRAPCCDKG SVKKGPWSPE EDRKLKDYIH TNGTGGNWIA LPTKAGLKRC GKSCRLRWLN YLRPNIKHGD FSDEEDRVIC ALFAAIGSRW SIIAAQLPGR
101: TDNDVKNYWN TKLKKKQLHL LIAAAAHGQQ YGSRPPAPPF TLEQQHHHHT SSTSIASLGQ LLMFGGRGGD QQQQQQYTSS FSSVDISNNT SAAAVGLQES
201: FMFGGLQFQQ QEEETNNLLS PPAASSSGND IMTYEHHEMI SPSGFFFYGD GAGAAATQEG TRFLY

Best Arabidopsis Sequence Match ( AT2G36890.1 )
(BLAST)

001: MGRAPCCDKA NVKRGPWSPE EDAKLKDYIE KQGTGGNWIA LPHKAGLRRC GKSCRLRWLN YLRPNIRHGD FTEEEDNIIY SLFASIGSRW SVIAAHLQGR
101: TDNDIKNYWN TKLKKKLIAT MAPPPHHHLA IATSSSSASP SSSSHYNMIN SLLPYNPSTN QLLTPHQGIM MTMMGQQQQL FYQEDMGNLV NSPNRNNLIM
201: SHQEDNQEQS TNKGIMLLSD VRSGSSTTST VTRVKMEHRD HDDHHHHHEE DERSMTSVVM EDYGMEEIKQ LISSSCTSSN NSLWFDENKT EDKFMLYY

Arabidopsis Description

RAX2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT2G36890]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.