Factsheet for Solyc09g008250.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005085	Potato	nucleus	94.59	93.33
PGSC0003DMT400009926	Potato	nucleus	93.24	92.0
Solyc11g069030.1.1	Tomato	nucleus	44.59	41.9
Solyc08g065910.1.1	Tomato	nucleus	30.07	41.78
Solyc06g074910.2.1	Tomato	nucleus	39.19	38.41
AT5G57620.1	Thale cress	nucleus	40.54	36.04
Bra006811.1-P	Field mustard	nucleus	40.2	35.95
CDX88631	Canola	nucleus	40.2	35.95
Solyc04g077260.2.1	Tomato	nucleus	39.19	35.69
Solyc06g074920.1.1	Tomato	nucleus	35.47	35.59
CDY11860	Canola	nucleus	39.86	35.33
Bra020428.1-P	Field mustard	nucleus	39.53	35.24
CDY25898	Canola	nucleus	38.51	35.19
Solyc12g008670.1.1	Tomato	nucleus	33.11	34.75
Solyc03g059200.1.1	Tomato	nucleus	30.41	34.22
Solyc02g091980.1.1	Tomato	nucleus	37.16	33.33
VIT_11s0052g01490.t01	Wine grape	nucleus	39.19	31.78
Solyc10g005760.1.1	Tomato	nucleus	31.42	27.68
Solyc07g006750.2.1	Tomato	mitochondrion	39.53	27.59
Solyc03g113530.2.1	Tomato	nucleus	25.68	21.41

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
UniProt:K4CQL4	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF654
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	EnsemblPlantsGene:Solyc09g008250.2	EnsemblPlants:Solyc09g008250.2.1	UniParc:UPI000276BD02
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr9:-:1718596..1720352

Molecular Weight (calculated)

33175.6 Da

IEP (calculated)

7.448

GRAVY (calculated)

-0.622

Length

296 amino acids

Sequence
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDAKLKEYID KFGTGGNWIA LPQKAGLRRC GKSCRLRWLN YLRPNIKHGE FSDEEDRIIC SLYANIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLMGF VSSSHKIRPL NHHDYHHQIP TNCYNNYSSL VQASSLLISS NYPNNTTFPC YETNIPSTTP SSTSFLSAGA STSCTSGITA
201: STFAGRTTSS DESYDISNFN FHSYMYNNNG VISEGEKLIS GNNASGCYVD EQQNPLDYSS LEEIKDLIST NHGTCNSTSF LLDHEIKTEE KVIMYY

Best Arabidopsis Sequence Match ( AT5G57620.1 )
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV

Arabidopsis Description

MYB36Transcription factor MYB36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.