Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH54481 | Soybean | nucleus | 79.32 | 63.94 |
| VIT_17s0000g05400.t01 | Wine grape | nucleus | 44.74 | 38.89 |
| Solyc03g113530.2.1 | Tomato | nucleus | 46.99 | 35.21 |
| PGSC0003DMT400062839 | Potato | nucleus | 40.6 | 35.18 |
| GSMUA_Achr3P10060_001 | Banana | nucleus | 39.1 | 32.5 |
| TraesCS4A01G113000.1 | Wheat | nucleus | 37.22 | 32.25 |
| TraesCS4D01G192400.1 | Wheat | nucleus | 37.22 | 32.14 |
| TraesCS4B01G191200.1 | Wheat | nucleus | 37.22 | 32.14 |
| HORVU4Hr1G055680.1 | Barley | nucleus | 36.09 | 31.79 |
| Zm00001d028777_P001 | Maize | nucleus | 36.47 | 30.41 |
| KRH41459 | Soybean | nucleus | 22.56 | 30.3 |
| Os03t0296000-00 | Rice | nucleus | 11.65 | 30.1 |
| OQU92760 | Sorghum | nucleus | 36.84 | 29.88 |
| KRG93460 | Soybean | nucleus | 38.72 | 29.86 |
| KRH60169 | Soybean | nucleus | 27.44 | 29.44 |
| KRH49024 | Soybean | nucleus | 27.44 | 28.08 |
| KRH74186 | Soybean | nucleus | 27.44 | 27.97 |
| KRH18536 | Soybean | endoplasmic reticulum | 39.1 | 27.73 |
| KRH46482 | Soybean | nucleus | 33.83 | 27.69 |
| KRG98401 | Soybean | nucleus | 33.83 | 27.61 |
| KRH15488 | Soybean | nucleus | 28.57 | 25.17 |
| KRH19894 | Soybean | nucleus | 28.57 | 24.92 |
| KRH32503 | Soybean | nucleus | 29.7 | 24.69 |
| KRH05529 | Soybean | nucleus | 28.57 | 24.6 |
| KRH25089 | Soybean | nucleus | 28.95 | 24.44 |
| KRH58168 | Soybean | nucleus | 30.45 | 24.18 |
| KRH04372 | Soybean | nucleus | 30.45 | 23.89 |
| KRH30589 | Soybean | nucleus | 28.95 | 23.4 |
| KRH26521 | Soybean | nucleus | 28.2 | 22.06 |
| KRH67733 | Soybean | nucleus | 26.69 | 22.05 |
| KRG96025 | Soybean | nucleus | 27.07 | 21.82 |
| KRH22841 | Soybean | nucleus | 27.82 | 21.76 |
| KRH15479 | Soybean | nucleus | 29.7 | 21.7 |
| KRH61462 | Soybean | nucleus | 28.2 | 21.43 |
| KRH77168 | Soybean | nucleus | 27.82 | 21.33 |
| KRH52158 | Soybean | nucleus | 28.2 | 21.13 |
| KRH18986 | Soybean | nucleus | 28.57 | 20.99 |
| KRH28317 | Soybean | nucleus | 27.44 | 20.98 |
| KRG88657 | Soybean | nucleus | 28.95 | 20.87 |
| KRH02902 | Soybean | nucleus | 27.82 | 20.27 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EMBL:ACUP02002689 | EnsemblPlantsGene:GLYMA_04G176700 | GO:GO:0000003 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009908 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0048443 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | UniProt:K7KKT3 | EnsemblPlants:KRH63439 | ProteinID:KRH63439 | ProteinID:KRH63439.1 | InterPro:Myb_dom |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF716 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000296734A | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:43999378..44000852
Molecular Weight (calculated)
30196.8 Da
IEP (calculated)
9.750
GRAVY (calculated)
-0.722
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRYPCEKIN VKRGVWTTEE DTKKLAFGSK HRSGNWTSVP KKSRLKRCGK SCRLRWTNYP RPDLKDDNFT TQEDLIMKLH AAIGSRWSIV AQQLLGRTDN
101: DVKNYWNTKL KKKLSQMGID PVTHKPFSKL ISDYGNIGDC QKPSTPITST NKDFKDAMML GSDPRQTLPQ GFTNINDQPK LSPKTIPVSM FGEDCLSKTS
201: SPSTPSTCFT SSAFSWNDFL LEDAFIPFTN QEQRLEAKSL QASSSDFHFS SSRDISFIKA MLDQEN
101: DVKNYWNTKL KKKLSQMGID PVTHKPFSKL ISDYGNIGDC QKPSTPITST NKDFKDAMML GSDPRQTLPQ GFTNINDQPK LSPKTIPVSM FGEDCLSKTS
201: SPSTPSTCFT SSAFSWNDFL LEDAFIPFTN QEQRLEAKSL QASSSDFHFS SSRDISFIKA MLDQEN
001: MGRPPCCDKS NVKKGLWTEE EDAKILAYVA IHGVGNWSLI PKKAGLNRCG KSCRLRWTNY LRPDLKHDSF STQEEELIIE CHRAIGSRWS SIARKLPGRT
101: DNDVKNHWNT KLKKKLMKMG IDPVTHKPVS QLLAEFRNIS GHGNASFKTE PSNNSILTQS NSAWEMMRNT TTNHESYYTN SPMMFTNSSE YQTTPFHFYS
201: HPNHLLNGTT SSCSSSSSST SITQPNQVPQ TPVTNFYWSD FLLSDPVPQV VGSSATSDLT FTQNEHHFNI EAEYISQNID SKASGTCHSA SSFVDEILDK
301: DQEMLSQFPQ LLNDFDY
101: DNDVKNHWNT KLKKKLMKMG IDPVTHKPVS QLLAEFRNIS GHGNASFKTE PSNNSILTQS NSAWEMMRNT TTNHESYYTN SPMMFTNSSE YQTTPFHFYS
201: HPNHLLNGTT SSCSSSSSST SITQPNQVPQ TPVTNFYWSD FLLSDPVPQV VGSSATSDLT FTQNEHHFNI EAEYISQNID SKASGTCHSA SSFVDEILDK
301: DQEMLSQFPQ LLNDFDY
Arabidopsis Description
MYB35Transcription factor MYB35 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.