Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46482 | Soybean | nucleus | 92.64 | 92.92 |
| VIT_19s0015g01280.t01 | Wine grape | nucleus | 79.45 | 78.48 |
| CDY64987 | Canola | nucleus | 52.15 | 71.13 |
| PGSC0003DMT400022402 | Potato | nucleus | 66.56 | 66.16 |
| Solyc10g005760.1.1 | Tomato | nucleus | 67.18 | 65.18 |
| Bra035604.1-P | Field mustard | nucleus | 57.98 | 59.06 |
| AT5G56110.1 | Thale cress | nucleus | 57.98 | 59.06 |
| TraesCS2D01G331700.1 | Wheat | nucleus | 63.5 | 58.81 |
| TraesCS2A01G331200.1 | Wheat | nucleus | 63.5 | 58.81 |
| TraesCS2B01G351000.1 | Wheat | nucleus | 63.19 | 58.52 |
| CDY17391 | Canola | nucleus | 57.36 | 58.44 |
| Bra002847.1-P | Field mustard | nucleus | 57.06 | 58.12 |
| CDY57424 | Canola | nucleus | 57.06 | 58.12 |
| Zm00001d025664_P001 | Maize | nucleus | 61.04 | 55.9 |
| EES12341 | Sorghum | nucleus | 61.35 | 53.91 |
| HORVU2Hr1G081720.2 | Barley | nucleus | 50.61 | 52.88 |
| KRH63439 | Soybean | nucleus | 27.61 | 33.83 |
| KRG93460 | Soybean | nucleus | 35.28 | 33.33 |
| KRH60169 | Soybean | nucleus | 24.85 | 32.66 |
| KRH49024 | Soybean | nucleus | 25.77 | 32.31 |
| KRH74186 | Soybean | nucleus | 25.77 | 32.18 |
| KRH18536 | Soybean | endoplasmic reticulum | 35.28 | 30.67 |
| KRH41459 | Soybean | nucleus | 18.1 | 29.8 |
| KRH15488 | Soybean | nucleus | 27.3 | 29.47 |
| KRH05529 | Soybean | nucleus | 27.61 | 29.13 |
| KRH25089 | Soybean | nucleus | 27.3 | 28.25 |
| KRH19894 | Soybean | nucleus | 26.07 | 27.87 |
| KRH30589 | Soybean | nucleus | 27.61 | 27.36 |
| KRH32503 | Soybean | nucleus | 26.38 | 26.88 |
| KRH58168 | Soybean | nucleus | 27.61 | 26.87 |
| KRH54481 | Soybean | nucleus | 26.99 | 26.67 |
| KRH04372 | Soybean | nucleus | 27.61 | 26.55 |
| KRH61462 | Soybean | nucleus | 27.91 | 26.0 |
| KRH52158 | Soybean | nucleus | 28.22 | 25.92 |
| KRH77168 | Soybean | nucleus | 27.3 | 25.65 |
| KRH67733 | Soybean | nucleus | 25.15 | 25.47 |
| KRH26521 | Soybean | nucleus | 26.38 | 25.29 |
| KRG96025 | Soybean | nucleus | 25.46 | 25.15 |
| KRH22841 | Soybean | nucleus | 26.07 | 25.0 |
| KRH28317 | Soybean | nucleus | 26.69 | 25.0 |
| KRG88657 | Soybean | nucleus | 27.91 | 24.66 |
| KRH15479 | Soybean | nucleus | 27.3 | 24.45 |
| KRH02902 | Soybean | nucleus | 26.69 | 23.84 |
| KRH18986 | Soybean | nucleus | 26.38 | 23.76 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100800764 | MapMan:15.5.2.1 | MapMan:21.8.1.1 | EMBL:ACUP02010882 | EnsemblPlantsGene:GLYMA_18G071600 |
| GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | UniProt:I1N059 | InterPro:IPR017930 | EnsemblPlants:KRG98401 |
| ProteinID:KRG98401 | ProteinID:KRG98401.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF653 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000233EB63 | SEG:seg |
Description
hypothetical protein
Coordinates
chr18:-:6727657..6728817
Molecular Weight (calculated)
36626.3 Da
IEP (calculated)
6.640
GRAVY (calculated)
-0.615
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRIPCCEKD NVKRGQWTPE EDNKLSSYIA QHGTRNWRLI PKNAGLQRCG KSCRLRWTNY LRPDLKHGQF SDSEEQTIVK LHSVFGNRWS LIAAQLPGRT
101: DNDVKNHWNT KLKKKLSGMG IDPVTHKPFS HLMAEIATTL APPQAAHLAE AALGCFKDEV LHLLTKKPIN FHQGQHSTAA LENNFTDYIN CKPDEKDTAI
201: EKIKFDLSKA IQHEPEMMPA NKPWDSNATT SANFVMPYGV FPTMPGFQFS PATFGKGDDA SPWSQSVCTG STCTVMDQQS QLHEKLEDEI GDDSEATKEI
301: RNLSNIFNSD CVVWDLPTDD LINPMV
101: DNDVKNHWNT KLKKKLSGMG IDPVTHKPFS HLMAEIATTL APPQAAHLAE AALGCFKDEV LHLLTKKPIN FHQGQHSTAA LENNFTDYIN CKPDEKDTAI
201: EKIKFDLSKA IQHEPEMMPA NKPWDSNATT SANFVMPYGV FPTMPGFQFS PATFGKGDDA SPWSQSVCTG STCTVMDQQS QLHEKLEDEI GDDSEATKEI
301: RNLSNIFNSD CVVWDLPTDD LINPMV
001: MGRIPCCEKE NVKRGQWTPE EDNKLASYIA QHGTRNWRLI PKNAGLQRCG KSCRLRWTNY LRPDLKHGQF SEAEEHIIVK FHSVLGNRWS LIAAQLPGRT
101: DNDVKNYWNT KLKKKLSGMG IDPVTHKPFS HLMAEITTTL NPPQVSHLAE AALGCFKDEM LHLLTKKRVD LNQINFSNHN PNPNNFHEIA DNEAGKIKMD
201: GLDHGNGIMK LWDMGNGFSY GSSSSSFGNE ERNDGSASPA VAAWRGHGGI RTAVAETAAA EEEERRKLKG EVVDQEEIGS EGGRGDGMTM MRNHHHHQHV
301: FNVDNVLWDL QADDLINHMV
101: DNDVKNYWNT KLKKKLSGMG IDPVTHKPFS HLMAEITTTL NPPQVSHLAE AALGCFKDEM LHLLTKKRVD LNQINFSNHN PNPNNFHEIA DNEAGKIKMD
201: GLDHGNGIMK LWDMGNGFSY GSSSSSFGNE ERNDGSASPA VAAWRGHGGI RTAVAETAAA EEEERRKLKG EVVDQEEIGS EGGRGDGMTM MRNHHHHQHV
301: FNVDNVLWDL QADDLINHMV
Arabidopsis Description
MYB80MYB80 [Source:UniProtKB/TrEMBL;Acc:A0A178UM75]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.