Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58168 | Soybean | nucleus | 89.68 | 90.75 |
| KRH77168 | Soybean | nucleus | 52.21 | 51.01 |
| KRH28317 | Soybean | nucleus | 50.74 | 49.43 |
| GSMUA_Achr9P09790_001 | Banana | nucleus | 34.51 | 44.49 |
| KRH74186 | Soybean | nucleus | 32.45 | 42.15 |
| KRH52158 | Soybean | nucleus | 43.66 | 41.69 |
| KRH49024 | Soybean | nucleus | 31.56 | 41.15 |
| KRH61462 | Soybean | nucleus | 42.48 | 41.14 |
| KRH19894 | Soybean | nucleus | 36.87 | 40.98 |
| Zm00001d034207_P001 | Maize | nucleus | 37.76 | 40.76 |
| TraesCS5B01G410500.1 | Wheat | nucleus | 36.87 | 40.19 |
| KRH60169 | Soybean | nucleus | 29.2 | 39.92 |
| TraesCS5D01G415800.1 | Wheat | nucleus | 36.58 | 39.87 |
| TraesCS5A01G405800.1 | Wheat | nucleus | 36.58 | 39.87 |
| Solyc02g091980.1.1 | Tomato | nucleus | 38.64 | 39.7 |
| KRH32503 | Soybean | nucleus | 37.46 | 39.69 |
| KRH25089 | Soybean | nucleus | 36.87 | 39.68 |
| HORVU5Hr1G098540.1 | Barley | nucleus | 36.28 | 39.55 |
| Os03t0771100-01 | Rice | nucleus | 37.17 | 39.25 |
| EER90818 | Sorghum | nucleus | 37.76 | 39.14 |
| PGSC0003DMT400055148 | Potato | nucleus | 38.05 | 39.09 |
| KRG88657 | Soybean | nucleus | 41.89 | 38.48 |
| KRH15479 | Soybean | nucleus | 41.3 | 38.46 |
| KRG96025 | Soybean | nucleus | 37.17 | 38.18 |
| KRH30589 | Soybean | nucleus | 36.87 | 37.99 |
| KRH15488 | Soybean | nucleus | 33.63 | 37.75 |
| KRH67733 | Soybean | nucleus | 35.69 | 37.58 |
| KRH18986 | Soybean | nucleus | 40.12 | 37.57 |
| KRH02902 | Soybean | nucleus | 39.82 | 36.99 |
| Zm00001d013164_P002 | Maize | nucleus | 37.76 | 36.57 |
| KRH26521 | Soybean | nucleus | 36.58 | 36.47 |
| KRH05529 | Soybean | nucleus | 33.04 | 36.25 |
| KRH22841 | Soybean | nucleus | 36.28 | 36.18 |
| KRH41459 | Soybean | nucleus | 20.65 | 35.35 |
| KRH63439 | Soybean | nucleus | 23.89 | 30.45 |
| KRG93460 | Soybean | nucleus | 28.32 | 27.83 |
| KRG98401 | Soybean | nucleus | 26.55 | 27.61 |
| KRH46482 | Soybean | nucleus | 26.25 | 27.38 |
| KRH18536 | Soybean | endoplasmic reticulum | 28.91 | 26.13 |
| KRH54481 | Soybean | nucleus | 23.6 | 24.24 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100791406 | MapMan:15.5.2.1 | EMBL:ACUP02010405 | ncoils:Coil | EnsemblPlantsGene:GLYMA_17G158000 |
| GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | UniProt:I1MVH6 | InterPro:IPR017930 | EnsemblPlants:KRH04372 |
| ProteinID:KRH04372 | ProteinID:KRH04372.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF654 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000233F3B8 | SEG:seg |
Description
hypothetical protein
Coordinates
chr17:+:13527627..13529508
Molecular Weight (calculated)
38525.4 Da
IEP (calculated)
8.007
GRAVY (calculated)
-0.603
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKA NVKRGPWSPE EDTKLKSYIE EHGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDNIIC SLYVTIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGK QRKEQQAQAR KVFNQKQEIK RESEDLMLPV GVIFRTPYYW PEQQHSWHIP VTNNASIQYS NLNYNNQTSS FIKHFPSNNI
201: VTATTMNSQH SSRDISLIQN QLHDLHPSTV SMVTTDTCHT SNVLQGFGNF SMASDLACVN QQQQIDGSMR VFYGLETMDV ATNGSTNTST STESISWGDI
301: SSLVYSPLLV SDYEACQQRL LMPQDVTFEE SSYFAMQTQ
101: TDNDIKNYWN TKLKKKLLGK QRKEQQAQAR KVFNQKQEIK RESEDLMLPV GVIFRTPYYW PEQQHSWHIP VTNNASIQYS NLNYNNQTSS FIKHFPSNNI
201: VTATTMNSQH SSRDISLIQN QLHDLHPSTV SMVTTDTCHT SNVLQGFGNF SMASDLACVN QQQQIDGSMR VFYGLETMDV ATNGSTNTST STESISWGDI
301: SSLVYSPLLV SDYEACQQRL LMPQDVTFEE SSYFAMQTQ
001: MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE NSGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEENIIC SLYLTIGSRW SIIAAQLPGR
101: TDNDIKNYWN TRLKKKLINK QRKELQEACM EQQEMMVMMK RQHQQQQIQT SFMMRQDQTM FTWPLHHHNV QVPALFMNQT NSFCDQEDVK PVLIKNMVKI
201: EDQELEKTNP HHHQDSMTNA FDHLSFSQLL LDPNHNHLGS GEGFSMNSIL SANTNSPLLN TSNDNQWFGN FQAETVNLFS GASTSTSADQ STISWEDISS
301: LVYSDSKQFF
101: TDNDIKNYWN TRLKKKLINK QRKELQEACM EQQEMMVMMK RQHQQQQIQT SFMMRQDQTM FTWPLHHHNV QVPALFMNQT NSFCDQEDVK PVLIKNMVKI
201: EDQELEKTNP HHHQDSMTNA FDHLSFSQLL LDPNHNHLGS GEGFSMNSIL SANTNSPLLN TSNDNQWFGN FQAETVNLFS GASTSTSADQ STISWEDISS
301: LVYSDSKQFF
Arabidopsis Description
RAX3RAX3 [Source:UniProtKB/TrEMBL;Acc:A0A178VK29]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.