Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG93460 | Soybean | nucleus | 85.33 | 92.75 |
| Solyc03g059200.1.1 | Tomato | nucleus | 41.33 | 58.94 |
| PGSC0003DMT400022009 | Potato | nucleus | 42.13 | 53.92 |
| AT3G28470.1 | Thale cress | nucleus | 44.53 | 52.68 |
| Bra025337.1-P | Field mustard | nucleus | 44.8 | 52.01 |
| CDX86430 | Canola | nucleus | 44.8 | 52.01 |
| VIT_14s0066g02180.t01 | Wine grape | nucleus | 53.87 | 46.33 |
| Os03t0296000-00 | Rice | nucleus | 12.27 | 44.66 |
| GSMUA_Achr3P10060_001 | Banana | nucleus | 37.87 | 44.38 |
| KRH63439 | Soybean | nucleus | 27.73 | 39.1 |
| TraesCS4D01G192400.1 | Wheat | nucleus | 31.73 | 38.64 |
| Zm00001d028777_P001 | Maize | nucleus | 32.8 | 38.56 |
| TraesCS4A01G113000.1 | Wheat | nucleus | 31.47 | 38.44 |
| TraesCS4B01G191200.1 | Wheat | nucleus | 31.47 | 38.31 |
| HORVU4Hr1G055680.1 | Barley | nucleus | 30.67 | 38.08 |
| OQU92760 | Sorghum | nucleus | 33.07 | 37.8 |
| KRH74186 | Soybean | nucleus | 25.33 | 36.4 |
| KRH49024 | Soybean | nucleus | 24.8 | 35.77 |
| KRG98401 | Soybean | nucleus | 30.67 | 35.28 |
| KRH60169 | Soybean | nucleus | 23.2 | 35.08 |
| KRH46482 | Soybean | nucleus | 30.13 | 34.77 |
| KRH41459 | Soybean | nucleus | 18.13 | 34.34 |
| KRH15488 | Soybean | nucleus | 27.47 | 34.11 |
| KRH05529 | Soybean | nucleus | 28.0 | 33.98 |
| KRH54481 | Soybean | nucleus | 27.2 | 30.91 |
| KRH25089 | Soybean | nucleus | 25.07 | 29.84 |
| KRH19894 | Soybean | nucleus | 24.27 | 29.84 |
| KRH58168 | Soybean | nucleus | 26.13 | 29.25 |
| KRH04372 | Soybean | nucleus | 26.13 | 28.91 |
| KRH32503 | Soybean | nucleus | 24.53 | 28.75 |
| KRH30589 | Soybean | nucleus | 25.07 | 28.57 |
| KRH26521 | Soybean | nucleus | 25.07 | 27.65 |
| KRH22841 | Soybean | nucleus | 25.07 | 27.65 |
| KRH18986 | Soybean | nucleus | 26.13 | 27.07 |
| CDX85201 | Canola | endoplasmic reticulum, vacuole | 46.93 | 26.91 |
| KRH77168 | Soybean | nucleus | 24.8 | 26.8 |
| KRH67733 | Soybean | nucleus | 22.67 | 26.4 |
| KRG96025 | Soybean | nucleus | 23.2 | 26.36 |
| KRH28317 | Soybean | nucleus | 24.0 | 25.86 |
| KRH02902 | Soybean | nucleus | 25.07 | 25.75 |
| KRH15479 | Soybean | nucleus | 24.27 | 25.0 |
| KRH61462 | Soybean | nucleus | 22.4 | 24.0 |
| KRG88657 | Soybean | nucleus | 23.47 | 23.85 |
| KRH52158 | Soybean | nucleus | 22.13 | 23.38 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100815077 | MapMan:15.5.2.1 | UniProt:A0A0R0GT36 | EMBL:ACUP02008088 | EnsemblPlantsGene:GLYMA_13G066600 |
| GO:GO:0000003 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006357 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 |
| GO:GO:0048443 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KRH18536 | ProteinID:KRH18536 | ProteinID:KRH18536.1 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF716 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0003DE78BE | SEG:seg |
Description
hypothetical protein
Coordinates
chr13:+:16641083..16643176
Molecular Weight (calculated)
41136.4 Da
IEP (calculated)
6.693
GRAVY (calculated)
-0.474
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MHIASPLHNS LSPSLAFLLL LCLISSLISK MGRPPCCDKS NVKRGLWTPE EDAKILAYVA NHGTGNWTLV PKKAGLNRCG KSCRLRWTNY LRPDLKHDGF
101: TPQEEDLIIN LHGAIGSRWS LIAKRLPGRT DNDVKNYWNT KLRKKLMKMG IDPVTHKPVS QVLSDLGSIS GLPNTTNQMA FINKDLMMSN MPPTKTEPSD
201: SNKSMVEHTQ EGQVHSWEHH IPYQVIINSE NVQPQVLSEA ASSTSSSSSS NLTQLGSPQS YSCQTPQAQI SPPCSSFDWS EFLHSDSFNW SLNPPSGLMQ
301: SEAELSDNTK SNGHDMQGAA SEGSGSGSGA VACGASMEYQ INKQCEAHSF VDGILDRDSE IRAAFPQLLD ASFDY
101: TPQEEDLIIN LHGAIGSRWS LIAKRLPGRT DNDVKNYWNT KLRKKLMKMG IDPVTHKPVS QVLSDLGSIS GLPNTTNQMA FINKDLMMSN MPPTKTEPSD
201: SNKSMVEHTQ EGQVHSWEHH IPYQVIINSE NVQPQVLSEA ASSTSSSSSS NLTQLGSPQS YSCQTPQAQI SPPCSSFDWS EFLHSDSFNW SLNPPSGLMQ
301: SEAELSDNTK SNGHDMQGAA SEGSGSGSGA VACGASMEYQ INKQCEAHSF VDGILDRDSE IRAAFPQLLD ASFDY
001: MGRPPCCDKS NVKKGLWTEE EDAKILAYVA IHGVGNWSLI PKKAGLNRCG KSCRLRWTNY LRPDLKHDSF STQEEELIIE CHRAIGSRWS SIARKLPGRT
101: DNDVKNHWNT KLKKKLMKMG IDPVTHKPVS QLLAEFRNIS GHGNASFKTE PSNNSILTQS NSAWEMMRNT TTNHESYYTN SPMMFTNSSE YQTTPFHFYS
201: HPNHLLNGTT SSCSSSSSST SITQPNQVPQ TPVTNFYWSD FLLSDPVPQV VGSSATSDLT FTQNEHHFNI EAEYISQNID SKASGTCHSA SSFVDEILDK
301: DQEMLSQFPQ LLNDFDY
101: DNDVKNHWNT KLKKKLMKMG IDPVTHKPVS QLLAEFRNIS GHGNASFKTE PSNNSILTQS NSAWEMMRNT TTNHESYYTN SPMMFTNSSE YQTTPFHFYS
201: HPNHLLNGTT SSCSSSSSST SITQPNQVPQ TPVTNFYWSD FLLSDPVPQV VGSSATSDLT FTQNEHHFNI EAEYISQNID SKASGTCHSA SSFVDEILDK
301: DQEMLSQFPQ LLNDFDY
Arabidopsis Description
MYB35Transcription factor MYB35 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.