CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19894	Soybean	nucleus	88.12	92.46
KRH67733	Soybean	nucleus	53.75	53.42
KRG96025	Soybean	nucleus	54.38	52.73
KRH26521	Soybean	nucleus	46.56	43.82
KRH22841	Soybean	nucleus	45.62	42.94
KRH60169	Soybean	nucleus	31.56	40.73
KRH25089	Soybean	nucleus	39.69	40.32
KRH74186	Soybean	nucleus	32.5	39.85
KRH49024	Soybean	nucleus	32.19	39.62
KRH30589	Soybean	nucleus	40.0	38.91
KRH15488	Soybean	nucleus	35.62	37.75
KRH04372	Soybean	nucleus	39.69	37.46
KRH41459	Soybean	nucleus	23.12	37.37
KRH28317	Soybean	nucleus	40.62	37.36
KRH77168	Soybean	nucleus	40.0	36.89
KRH58168	Soybean	nucleus	37.81	36.12
KRH05529	Soybean	nucleus	34.69	35.92
KRH15479	Soybean	nucleus	39.69	34.89
KRH52158	Soybean	nucleus	38.44	34.65
KRH61462	Soybean	nucleus	37.5	34.29
KRG88657	Soybean	nucleus	39.06	33.88
KRH18986	Soybean	nucleus	36.88	32.6
KRH02902	Soybean	nucleus	36.56	32.05
KRH63439	Soybean	nucleus	24.69	29.7
KRG93460	Soybean	nucleus	28.75	26.67
KRH46482	Soybean	nucleus	26.88	26.46
KRG98401	Soybean	nucleus	26.88	26.38
KRH18536	Soybean	endoplasmic reticulum	28.75	24.53
KRH54481	Soybean	nucleus	24.06	23.33

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100820139	MapMan:15.5.2.1	EMBL:ACUP02006123	EnsemblPlantsGene:GLYMA_10G054700	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	UniProt:I1L8X4	InterPro:IPR017930	EnsemblPlants:KRH32503	ProteinID:KRH32503
ProteinID:KRH32503.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF687
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000233C32B	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:4959946..4962470

Molecular Weight (calculated)

35692.9 Da

IEP (calculated)

6.758

GRAVY (calculated)

-0.649

Length

320 amino acids

Sequence
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDEKLREYIE KHGTGGNWIA LPQKAGLKRC GKSCRLRWLN YLRPNLKHGE FSEGEDRIIC TLFASIGSRW SIIASQLPGR
101: TDNDIKNYWN TKLKKKMMGV KMNPSALKKP HQVNLSSMLQ NSTPSSPFTS LSFKNNHNNS YYYQPHLPFT GSESMTYSSL LSDNYSTFES LQNYQVNNSG
201: FMLGCETSCS SSSDGSCNNN QINHVKEAEL GFIGDGTFCD QIIGGGFSYL NSGVELEDTQ KLVPSNAGKV NSGVTDEESR LWGESPLEYG LEEIKQLIST
301: SSCNNFMLDD SKTGEMAMYY

Best Arabidopsis Sequence Match ( AT2G36890.1 )
(BLAST)

001: MGRAPCCDKA NVKRGPWSPE EDAKLKDYIE KQGTGGNWIA LPHKAGLRRC GKSCRLRWLN YLRPNIRHGD FTEEEDNIIY SLFASIGSRW SVIAAHLQGR
101: TDNDIKNYWN TKLKKKLIAT MAPPPHHHLA IATSSSSASP SSSSHYNMIN SLLPYNPSTN QLLTPHQGIM MTMMGQQQQL FYQEDMGNLV NSPNRNNLIM
201: SHQEDNQEQS TNKGIMLLSD VRSGSSTTST VTRVKMEHRD HDDHHHHHEE DERSMTSVVM EDYGMEEIKQ LISSSCTSSN NSLWFDENKT EDKFMLYY

Arabidopsis Description

RAX2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT2G36890]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.