Factsheet for Os07t0235800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0818800-01	Rice	nucleus	67.66	67.97
EER96101	Sorghum	plastid	78.44	63.45
Zm00001d019230_P002	Maize	plastid	76.61	62.43
Os05t0121600-01	Rice	nucleus	49.08	41.8
Os04t0649100-03	Rice	nucleus	44.04	41.74
Os06t0639200-01	Rice	nucleus	28.67	37.43
Os08t0171100-01	Rice	cytosol, nucleus	5.05	37.29
Os02t0747600-01	Rice	nucleus	20.64	26.63
Os05t0389000-02	Rice	nucleus	20.87	21.41
Os06t0658000-00	Rice	endoplasmic reticulum, extracellular	6.19	14.75

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	EntrezGene:4342787	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:BAC21448.1	ProteinID:BAF21158.1	InterPro:DNA-bd_dom_sf	EMBL:DQ374663	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os07g0235800
EnsemblPlants:Os07t0235800-01	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF36
UniProt:Q8H443	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00000AD74B	RefSeq:XP_015647891.1	SEG:seg

Description

SUPERNUMERARY BRACT GENEAP2 domain containing transcription factor, Control of inflorescence architecture, Floral meristem establishment (Os07t0235800-01)

Coordinates

chr7:+:7545547..7549914

Molecular Weight (calculated)

47441.4 Da

IEP (calculated)

7.306

GRAVY (calculated)

-0.551

Length

436 amino acids

Sequence
(BLAST)

001: MVLDLNVESP GGSAATSSSS TPPPPPDGGG GGYFRFDLLG GSPDEDGCSS PVMTRQLFPS PSAVVALAGD GSSTPPLTMP MPAAAGEGPW PRRAADLGVA
101: QSQRSPAGGK KSRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAHAAARA YDRAAIKFRG LDADINFNLN DYEDDLKQMR NWTKEEFVHI
201: LRRQSTGFAR GSSKYRGVTL HKCGRWEARM GQLLGKKYIY LGLFDSEIEA ARAYDRAAIR FNGREAVTNF DPSSYDGDVL PETDNEVVDG DIIDLNLRIS
301: QPNVHELKSD GTLTGFQLNC DSPEASSSVV TQPISPQWPV LPQGTSMSQH PHLYASPCPG FFVNLREVPM EKRPELGPQS FPTSWSWQMQ GSPLPLLPTA
401: ASSGFSTGTV ADAARSPSSR PHPFPGHHQF YFPPTA

Best Arabidopsis Sequence Match ( AT2G28550.3 )
(BLAST)

001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP

Arabidopsis Description

RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.