Factsheet for Os06t0639200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G440400.1	Wheat	nucleus	57.48	47.41
TraesCS7D01G512600.1	Wheat	nucleus	56.89	43.78
OQU76762	Sorghum	nucleus	61.68	43.64
Zm00001d046621_P001	Maize	nucleus	50.3	42.75
Os08t0171100-01	Rice	cytosol, nucleus	6.29	35.59
HORVU7Hr1G116220.4	Barley	nucleus	57.78	32.6
Os04t0649100-03	Rice	nucleus	40.12	29.13
Os07t0235800-01	Rice	nucleus	37.43	28.67
Os03t0818800-01	Rice	nucleus	37.13	28.57
Os05t0121600-01	Rice	nucleus	39.22	25.59
Os02t0747600-01	Rice	nucleus	20.06	19.82
CDY19560	Canola	nucleus	4.79	15.53
Os05t0389000-02	Rice	nucleus	18.26	14.35
Os06t0658000-00	Rice	endoplasmic reticulum, extracellular	2.4	4.37
Solyc02g030200.1.1	Tomato	nucleus	0.6	3.51

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A0N7KMH0	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:BAS98793.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os06g0639200	EnsemblPlants:Os06t0639200-01	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF18	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI0001C7C420	SEG:seg	:	:	:	:

Description

APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 59Similar to Transcription factor AP2D22 (Fragment). (Os06t0639200-01)

Coordinates

chr6:-:25976989..25980815

Molecular Weight (calculated)

36106.1 Da

IEP (calculated)

6.925

GRAVY (calculated)

-0.606

Length

334 amino acids

Sequence
(BLAST)

001: MCRDCGKQVY LGGFDTAQAA ARAYDQAAIK FRGVEADINF TLDDYKEDIK KMNNFSKEEF VQVLRRQGAG FVRGSSRFRG VTLHKCGKWE ARIGQLMGKK
101: YVYLGLYDTE MEAAKAYDKA AIKCCGKEAV TNFDTQAYED ELNLQSWDSE LDLELSLGCS GGERAAGEVL HSAPSNQRTS LTFMLPEEEE MTACHRQRSI
201: WARPSLAPAM PDGGAVIRPD QHQHHPSSRN MLLMSQVISS SGGGGGSGRQ GAAELHMRPR HGWSSGGNNW APPYAARPRL PGAEDDEDDD SAAAASSGFP
301: MGQVATASSP SRPSSSSCSS RRSSTAAATA TTGR

Best Arabidopsis Sequence Match ( AT2G28550.3 )
(BLAST)

001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP

Arabidopsis Description

RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.