Factsheet for HORVU7Hr1G116220.4

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G440400.1	Wheat	nucleus	57.6	84.2
TraesCS7D01G512600.1	Wheat	nucleus	61.15	83.41
Os06t0639200-01	Rice	nucleus	32.6	57.78
Zm00001d046621_P001	Maize	nucleus	34.8	52.42
OQU76762	Sorghum	nucleus	39.02	48.94
HORVU2Hr1G061450.1	Barley	nucleus	8.11	44.86
HORVU2Hr1G063070.1	Barley	nucleus	7.09	42.86
HORVU5Hr1G112440.1	Barley	nucleus	26.35	35.45
HORVU1Hr1G011800.4	Barley	nucleus	28.38	32.68
Solyc02g030200.1.1	Tomato	nucleus	2.53	26.32
HORVU7Hr1G070230.12	Barley	nucleus	12.84	25.59
HORVU6Hr1G075640.13	Barley	nucleus	14.02	22.19
HORVU1Hr1G056500.15	Barley	nucleus, plastid	14.53	19.11
HORVU3Hr1G004480.38	Barley	nucleus, plastid	8.61	18.15
CDY19560	Canola	nucleus	2.36	13.59

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A287XXE0	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU7Hr1G116220	EnsemblPlants:HORVU7Hr1G116220.4	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PFscan:PS51032
PANTHER:PTHR32467	PANTHER:PTHR32467:SF9	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000B4871CF	SEG:seg

Description

No Description!

Coordinates

chrchr7H:+:642974270..642977311

Molecular Weight (calculated)

64739.9 Da

IEP (calculated)

9.686

GRAVY (calculated)

-0.463

Length

592 amino acids

Sequence
(BLAST)

001: SPSIPFPFLR RADTQRQPAL LPLCSHPVLL RLRLRHPRRH QHQRQPKHKP TLQILYHRHR AASCSRTHTC ASAQSCHRLL PRLVLYTPSI TSESTQASGL
101: LNLGRSETRR MHPAMAAAFC YGGEDEDAGV VVAEGGAGAG WAVFGGGGGE ARPAFVTQQL FPTAAAAVTG TATQQQQQQQ AVERCVLAGA AGAHWTRPLS
201: RTKSRRGPRS RSSQYRGVTF YRRTGRWESH IWSVRHPPSP SKIHGDSRAS NTIITQTVFP RSCIALVYIY LRISVSRPCV LPICRDCGKQ VYLGGFDTAQ
301: AAARAYDQAA IKFRGVEADI NFLLDDYKED IGKMSLLSKE ELVQVLRRQG AGFVRGSSRF RGVTLHKCGK WEARIGQLMG KKFVYLGLYD TEMDAAKAYD
401: KAALDCCGEE AMTNFEPKAA VAACDGDLDL HSWGGEPDLE LSLGCSGGGN PSTVTTGDTL RTAAAPGRQR TSLTFEMPEE EEATAPWHPG RNRSIWIRPS
501: PTSITSGLRC PDGDHRPAFT GSSMLHMCQI GGGGREEPHM PWWPTGSGVD RWQPYGAEAA AAASSGFPPA PGLGGVQRLH QHRPGSREHL WR

Best Arabidopsis Sequence Match ( AT2G28550.3 )
(BLAST)

001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP

Arabidopsis Description

RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.