Factsheet for TraesCS7B01G440400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G512600.1	Wheat	nucleus	92.84	86.64
HORVU7Hr1G116220.4	Barley	nucleus	84.2	57.6
Os06t0639200-01	Rice	nucleus	47.41	57.48
Zm00001d046621_P001	Maize	nucleus	50.86	52.42
OQU76762	Sorghum	nucleus	56.79	48.73
TraesCS2B01G542400.2	Wheat	nucleus	41.48	34.71
TraesCS1B01G076300.1	Wheat	nucleus	41.48	32.81
TraesCS5B01G486900.1	Wheat	nucleus	19.75	30.65
Solyc02g030200.1.1	Tomato	nucleus	4.2	29.82
TraesCS6B01G334700.1	Wheat	nucleus	21.23	22.93
TraesCS7B01G186900.1	Wheat	nucleus	19.01	21.81
TraesCS1B01G254300.1	Wheat	nucleus	20.25	19.43
CDY19560	Canola	nucleus	3.46	13.59

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF9	SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS7B01G440400	EnsemblPlants:TraesCS7B01G440400.1	TIGR:cd00018
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:705965314..705967595

Molecular Weight (calculated)

43702.4 Da

IEP (calculated)

7.906

GRAVY (calculated)

-0.462

Length

405 amino acids

Sequence
(BLAST)

001: MHPAMAAAAF FHGGDEEKAG VVVQGGLNAA RPAFVTQQLF PTTAATQQQA TELPWGGAAA HWARPASRTK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD
101: CGKQVYLGGF DTAQAAARAY DQAAIKFRGV EADINFVLDD YKEDIGKMSV LSKEELVQVL RRQGAGFVRG SSRFRGVTLH KCGKWEARIG QLMGKKFVYL
201: GLYDTEMDAA KAYDKAALEC SGEEAVTNFE PNAAAAVCDG ELGLQAWGGE PDLELSLGCS GGGDSSMVTS GDTLHTAAVP GSRRTSLTFE MPEEEEATAP
301: WHPGRTRSIW MRPSPASITP ALRCPDGDHR PTIPLSSMLQ MGQIGGGGRA EPHMLGWPMG GSDRWQPYAA EAAAAASSGF LPAPGLGGVQ RQNHHRPGSR
401: EQLWH

Best Arabidopsis Sequence Match ( AT2G28550.3 )
(BLAST)

001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP

Arabidopsis Description

RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.