Factsheet for TraesCS7B01G186900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G292500.1	Wheat	plastid	98.87	99.43
HORVU7Hr1G070230.12	Barley	nucleus	80.74	95.96
TraesCS7A01G292900.1	Wheat	plastid	98.3	89.66
Zm00001d024468_P003	Maize	nucleus	60.62	73.79
KXG24541	Sorghum	nucleus	62.61	69.72
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	32.29	69.09
GSMUA_Achr6P02730_001	Banana	nucleus	31.73	67.88
TraesCS6B01G334700.1	Wheat	nucleus	38.81	36.53
TraesCS7B01G440400.1	Wheat	nucleus	21.81	19.01
TraesCS1B01G254300.1	Wheat	nucleus	22.66	18.96
TraesCS5B01G486900.1	Wheat	nucleus	13.6	18.39
TraesCS2B01G542400.2	Wheat	nucleus	24.08	17.56
TraesCS1B01G076300.1	Wheat	nucleus	25.21	17.38

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS7B01G186900	EnsemblPlants:TraesCS7B01G186900.1	TIGR:cd00018	SEG:seg

Description

No Description!

Coordinates

chr7B:-:312441380..312443729

Molecular Weight (calculated)

38440.9 Da

IEP (calculated)

5.722

GRAVY (calculated)

-0.577

Length

353 amino acids

Sequence
(BLAST)

001: MATTVQPHSP DPTAITTTPA PPPPPSPPRQ ENPTAAGEGV EIAALDEQPA AVAVAVADKG KTAPGGGKLV AEAMRKCAAP RSSCYHGVTR LKWSGKYEAH
101: LWDNTSQVEG RKRKGKHVYL GSYVTEENAA RAHDLAALKY WGITQPTKLN FNISDYAKEI EIMKSMNQDE FVAYIRRQSS CFSRGTSSYR GVTRRKDGKW
201: QARIGRIGES RDTKDIYLGT FETEVEAAEA YDLAAIQLRG VHAVTNFDIS NYSEEGLKKL EGSSEVVNLE DQSEVTKLAV TNLDISKHCE DGLKKLDGAS
301: QVVNLESQSE VTKLSVTNFD ISNCCEDGLK KLEGSSEVAN LEDQSEVTKL AGQ

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.