CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024468_P003	Maize	nucleus	84.54	92.41
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	37.85	72.73
HORVU7Hr1G070230.12	Barley	nucleus	67.82	72.39
GSMUA_Achr6P02730_001	Banana	nucleus	36.91	70.91
TraesCS7D01G292500.1	Wheat	plastid	69.4	62.68
TraesCS7B01G186900.1	Wheat	nucleus	69.72	62.61
TraesCS7A01G292900.1	Wheat	plastid	69.4	56.85
KXG24410	Sorghum	mitochondrion	11.99	46.34
KXG30761	Sorghum	nucleus	45.11	39.18
EER87748	Sorghum	nucleus	14.51	23.47
OQU77289	Sorghum	nucleus	27.76	20.14
EES19464	Sorghum	nucleus	24.61	18.75
OQU76762	Sorghum	nucleus	27.13	18.22
EER93202	Sorghum	nucleus	24.29	17.82
OQU82446	Sorghum	endoplasmic reticulum, vacuole	22.08	17.68
EER96101	Sorghum	plastid	26.81	15.77

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1B6PFT0	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KXG24541	ProteinID:KXG24541	ProteinID:KXG24541.1	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47	SMART:SM00380	EnsemblPlantsGene:SORBI_3007G056700
SUPFAM:SSF54171	UniParc:UPI0001C80C52	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:5831683..5835331

Molecular Weight (calculated)

33715.4 Da

IEP (calculated)

6.123

GRAVY (calculated)

-0.533

Length

317 amino acids

Sequence
(BLAST)

001: MATVHPPSPA GPTAPLPPQE EEEEEVERHV GDAVPDPPAV VSGEPDAAGA EASGGGGEIA ALDKQLAVVV GGGGGSGDER RLAGAGAVAG AVAASAAAAG
101: GGGKLVAEAM RKYAAPRSSK FHGVTRLKWS GKYEAHLWDN TSQVKGRKRK GKHVYLGSYV NEEQAAKAHD LAALKYWGTG PNTKLNFNIS DYEKEIEVMK
201: TMSQDEFVAY IRRQSSCFSR GTSSYRGVTR RKDGKWQARI GRIGESRDTK DIYLGTFETE EEAAEAYDLA AIELRGVHAV TNFDISNYCE VGLRKLEGPS
301: EVVNLEGPSE VMKHAGQ

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.