CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018050_P003	Maize	nucleus	79.45	75.13
TraesCS6A01G306300.2	Wheat	nucleus	70.41	68.53
Os02t0747600-01	Rice	nucleus	63.01	68.05
TraesCS6B01G334700.1	Wheat	nucleus	69.86	68.0
TraesCS6D01G285400.2	Wheat	nucleus	69.86	68.0
HORVU6Hr1G075640.13	Barley	nucleus	69.59	67.91
GSMUA_Achr7P16540_001	Banana	mitochondrion	38.36	50.91
KXG24410	Sorghum	mitochondrion	10.41	46.34
KXG24541	Sorghum	nucleus	39.18	45.11
EER87748	Sorghum	nucleus	16.16	30.1
EER93202	Sorghum	nucleus	25.75	21.76
EES19464	Sorghum	nucleus	23.84	20.91
OQU77289	Sorghum	nucleus	24.38	20.37
OQU82446	Sorghum	endoplasmic reticulum, vacuole	21.37	19.7
OQU76762	Sorghum	nucleus	24.38	18.86
EER96101	Sorghum	plastid	25.75	17.44

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A194YRE6	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KXG30761	ProteinID:KXG30761	ProteinID:KXG30761.1	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47	SMART:SM00380	EnsemblPlantsGene:SORBI_3004G237100
SUPFAM:SSF54171	UniParc:UPI0002207243	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:58501436..58505548

Molecular Weight (calculated)

39849.1 Da

IEP (calculated)

5.163

GRAVY (calculated)

-0.724

Length

365 amino acids

Sequence
(BLAST)

001: MEESDVGVNP GKQMEEDKAA GVSGDEGKIE RSHSINLNRA PTVAVEARST QGNVETHGAV VSGTKDAGTG KAEQSSGDGQ EKLPKCEQVD YESEIEGCVD
101: DENPVKKAAL VTLVGNEYCG GDDDERVQVL TIVKKDEPAD DIGDCINPGT VAGYSEVKGA VGASAATSAV RPAGSRSSSF HGVTRHRWSG KYEAHLWDSS
201: CRVEGRRRKG KQVYLGSYDT EEKAARAYDV AAIKYWGGNT RLNFPIEQYG KELEDIRDLS REECVTYLRR RSSCFSRGAS IYRGVTRRQK DGRWQARIGL
301: VAGTRDIYLG TFKTEEEAAE AYDIAAIEIR GKNAVTNFDR SNYVDKGMHC IEGEGLRLLA SKPEE

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.