CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G063070.1	Barley	nucleus	64.63	54.08
VIT_04s0023g00970.t01	Wine grape	nucleus	53.66	37.61
Zm00001d014670_P001	Maize	endoplasmic reticulum, golgi	58.54	25.67
CDY71682	Canola	nucleus	60.98	24.15
PGSC0003DMT400023709	Potato	nucleus	32.93	12.62
KXG24541	Sorghum	nucleus	46.34	11.99
KXG30761	Sorghum	nucleus	46.34	10.41
EER87748	Sorghum	nucleus	21.95	9.18
OQU82446	Sorghum	endoplasmic reticulum, vacuole	40.24	8.33
OQU77289	Sorghum	nucleus	43.9	8.24
EER93202	Sorghum	nucleus	41.46	7.87
EER96101	Sorghum	plastid	43.9	6.68
OQU76762	Sorghum	nucleus	36.59	6.36
EES19464	Sorghum	nucleus	31.71	6.25
Solyc03g123430.2.1	Tomato	nucleus	32.93	5.26
Os06t0658000-00	Rice	endoplasmic reticulum, extracellular	3.66	1.64
PGSC0003DMT400055211	Potato	nucleus	3.66	0.83
PGSC0003DMT400023711	Potato	nucleus	0.0	0.0
PGSC0003DMT400035808	Potato	nucleus, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:KXG24410	EnsemblPlantsGene:SORBI_3007G038300	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:AP2-like_transcript_factor
PANTHER:PTHR32467	PANTHER:PTHR32467:SF48	ProteinID:KXG24410	ProteinID:KXG24410.1	UniParc:UPI00081AE51D	UniProt:A0A1B6PFE6
MapMan:15.5.7.3	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:3725158..3725742

Molecular Weight (calculated)

9543.7 Da

IEP (calculated)

11.592

GRAVY (calculated)

-0.524

Length

82 amino acids

Sequence
(BLAST)

1: MKHMTRQEYI AYLRRNSSGF SRGASKYRRV TRHHQHGRWQ ARIGRVAGNK DLYLGKFSKL AAFFSCLFVC LENSVKPLAP IK

Best Arabidopsis Sequence Match ( AT5G57390.2 )
(BLAST)

001: MQQVQSLGGV VFSSDLQPPL HPPSAAEIYD SELKSIAASF LGNYSGGHSS EVSSVHKQQP NPLAVSEASP TPKKNVESFG QRTSIYRGVT RHRWTGRYEA
101: HLWDNSCRRE GQSRKGRQVY LGGYDKEDKA ARAYDLAALK YWGPTTTTNF PISNYESELE EMKHMTRQEF VASLRRKSSG FSRGASMYRG VTRHHQHGRW
201: QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGLNA VTNFDISRYD VKSIASCNLP VGGLMPKPSP ATAAADKTVD LSPSDSPSLT TPSLTFNVAT
301: PVNDHGGTFY HTGIPIKPDP ADHYWSNIFG FQANPKAEMR PLANFGSDLH NPSPGYAIMP VMQEGENNFG GSFVGSDGYN NHSAASNPVS AIPLSSTTTM
401: SNGNEGYGGN INWINNNISS SYQTAKSNLS VLHTPVFGLE

Arabidopsis Description

AIL5AP2-like ethylene-responsive transcription factor AIL5 [Source:UniProtKB/Swiss-Prot;Acc:Q6PQQ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.