Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400023711 | Potato | nucleus | 50.88 | 94.91 |
PGSC0003DMT400023709 | Potato | nucleus | 39.57 | 94.86 |
HORVU2Hr1G063070.1 | Barley | nucleus | 8.19 | 42.86 |
VIT_04s0023g00970.t01 | Wine grape | nucleus | 9.75 | 42.73 |
Solyc02g030200.1.1 | Tomato | nucleus | 3.7 | 33.33 |
KXG24410 | Sorghum | mitochondrion | 5.26 | 32.93 |
Zm00001d037511_P001 | Maize | nucleus | 12.09 | 31.31 |
Os06t0658000-00 | Rice | endoplasmic reticulum, extracellular | 9.36 | 26.23 |
Solyc03g044300.2.1 | Tomato | nucleus | 20.27 | 25.94 |
Solyc02g064960.2.1 | Tomato | nucleus | 21.64 | 22.02 |
CDY71682 | Canola | nucleus | 8.77 | 21.74 |
Solyc10g084340.1.1 | Tomato | nucleus | 19.3 | 21.43 |
Solyc02g093150.2.1 | Tomato | nucleus | 18.52 | 21.3 |
Solyc09g007260.2.1 | Tomato | nucleus | 18.52 | 20.88 |
Solyc06g075510.2.1 | Tomato | nucleus | 19.1 | 20.68 |
Solyc04g049800.2.1 | Tomato | nucleus | 15.4 | 19.85 |
Solyc11g072600.1.1 | Tomato | nucleus | 18.52 | 19.75 |
Solyc02g030210.2.1 | Tomato | nucleus | 13.26 | 19.37 |
Protein Annotations
MapMan:15.5.7.3 | Gene3D:3.30.730.10 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ncoils:Coil |
InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
InterPro:IPR001471 | InterPro:IPR036955 | UniProt:K4BN42 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
PANTHER:PTHR32467 | PANTHER:PTHR32467:SF47 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:Solyc03g123430.2 | EnsemblPlants:Solyc03g123430.2.1 |
UniParc:UPI00027659F6 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:70282955..70286924
Molecular Weight (calculated)
56906.7 Da
IEP (calculated)
5.242
GRAVY (calculated)
-0.753
Length
513 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNWLGFSLT PDFRIDDDDE EEVKNYERRN EAAENTPVSV MPLSTNRSLC MMDPFPRCEP TEDCWRYENH EMSTANNPEE EEGPKLEDFL GCCYSNSPSN
101: EEQQISEINV NIPPSINQSD HEQHQLEIGA NMKLIQSPQM MIQNSQLQSS HHEFAHSTSS VYHLPFDGAT SVSGFKSWLR QASVAAPLMS SAEEIVNPSN
201: CQALSLAAAP KKRPVAVKNG GGSKESVPRK SIDTFGQRTS QYRGVTRHRW TGRYEAHLWD NSCRKEGQTR KGRQGGYDTE EKAARAYDLA ALKYWGPNTH
301: INSPEKHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG TSAVTNFDIS KYDVKRICSS STLITGDLAK RSPSKDSVVC PSSYEDYSSC
401: TTSPQPILAI TNGEQLQQPI DSFMNMVPLM GAAGSSSRSS SNAPSPKCSG SGEMSCDFGV GLEYPQAYYS PVQVQDHKFE DGSKENDDNS SSSGQIGNMD
501: LVHPVPMFAL WNQ
101: EEQQISEINV NIPPSINQSD HEQHQLEIGA NMKLIQSPQM MIQNSQLQSS HHEFAHSTSS VYHLPFDGAT SVSGFKSWLR QASVAAPLMS SAEEIVNPSN
201: CQALSLAAAP KKRPVAVKNG GGSKESVPRK SIDTFGQRTS QYRGVTRHRW TGRYEAHLWD NSCRKEGQTR KGRQGGYDTE EKAARAYDLA ALKYWGPNTH
301: INSPEKHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG TSAVTNFDIS KYDVKRICSS STLITGDLAK RSPSKDSVVC PSSYEDYSSC
401: TTSPQPILAI TNGEQLQQPI DSFMNMVPLM GAAGSSSRSS SNAPSPKCSG SGEMSCDFGV GLEYPQAYYS PVQVQDHKFE DGSKENDDNS SSSGQIGNMD
501: LVHPVPMFAL WNQ
001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE
Arabidopsis Description
PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.