Factsheet for Os06t0658000-00

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
nucleus 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035808	Potato	nucleus, plastid	33.33	39.87
PGSC0003DMT400055211	Potato	nucleus	33.88	17.17
Zm00001d013170_P001	Maize	nucleus	38.8	14.85
Os02t0747600-01	Rice	nucleus	24.04	13.02
Solyc03g123430.2.1	Tomato	nucleus	26.23	9.36
Os05t0389000-02	Rice	nucleus	18.58	8.0
Os03t0818800-01	Rice	nucleus	16.94	7.14
Os07t0235800-01	Rice	nucleus	14.75	6.19
Os04t0649100-03	Rice	nucleus	15.3	6.09
Os05t0121600-01	Rice	nucleus	16.39	5.86
HORVU2Hr1G063070.1	Barley	nucleus	2.19	4.08
KXG24410	Sorghum	mitochondrion	1.64	3.66
Os08t0171100-01	Rice	cytosol, nucleus	1.09	3.39
CDY71682	Canola	nucleus	3.28	2.9
Os06t0639200-01	Rice	nucleus	4.37	2.4
VIT_04s0023g00970.t01	Wine grape	nucleus	1.09	1.71

Protein Annotations

EnsemblPlants:Os06t0658000-00	EnsemblPlantsGene:Os06g0658000	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:AP2-like_transcript_factor
PANTHER:PTHR32467	PANTHER:PTHR32467:SF69	ProteinID:BAS98955.1	SEG:seg	UniParc:UPI000393BB55	UniProt:A0A0P0X020
MapMan:35.1	:	:	:	:	:

Description

Similar to AP2-EREBP transcription factor (Fragment). (Os06t0658000-00)

Coordinates

chr6:-:27047218..27048052

Molecular Weight (calculated)

19610.4 Da

IEP (calculated)

7.997

GRAVY (calculated)

-0.161

Length

183 amino acids

Sequence
(BLAST)

001: MFAKLMPCGL VGHASVFIIT KYHYFSVFSG VGEEGPAEGA PKMEDFLGGL GGGGGAVAAA PAAAPEDQLS CGELGSIAAG FLRRYPAPEN AGGVTIAMAT
101: DAAAELADPA RRTAETFGQR TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQGLCM HVITHIQQIN LQILAYGRYI VDH

Best Arabidopsis Sequence Match ( AT5G57390.1 )
(BLAST)

001: MKNNNNKSSS SSSYDSSLSP SSSSSSHQNW LSFSLSNNNN NFNSSSNPNL TSSTSDHHHP HPSHLSLFQA FSTSPVERQD GSPGVSPSDA TAVLSVYPGG
101: PKLENFLGGG ASTTTTRPMQ QVQSLGGVVF SSDLQPPLHP PSAAEIYDSE LKSIAASFLG NYSGGHSSEV SSVHKQQPNP LAVSEASPTP KKNVESFGQR
201: TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQVYLG GYDKEDKAAR AYDLAALKYW GPTTTTNFPI SNYESELEEM KHMTRQEFVA SLRRKSSGFS
301: RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDISRYDVK SIASCNLPVG GLMPKPSPAT AAADKTVDLS
401: PSDSPSLTTP SLTFNVATPV NDHGGTFYHT GIPIKPDPAD HYWSNIFGFQ ANPKAEMRPL ANFGSDLHNP SPGYAIMPVM QEGENNFGGS FVGSDGYNNH
501: SAASNPVSAI PLSSTTTMSN GNEGYGGNIN WINNNISSSY QTAKSNLSVL HTPVFGLE

Arabidopsis Description

AIL5AP2-like ethylene-responsive transcription factor AIL5 [Source:UniProtKB/Swiss-Prot;Acc:Q6PQQ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.