Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0658000-00 | Rice | endoplasmic reticulum, extracellular | 14.85 | 38.8 |
| Zm00001d037511_P001 | Maize | nucleus | 14.02 | 33.84 |
| PGSC0003DMT400035808 | Potato | nucleus, plastid | 10.46 | 32.68 |
| PGSC0003DMT400055211 | Potato | nucleus | 23.22 | 30.75 |
| Zm00001d014670_P001 | Maize | endoplasmic reticulum, golgi | 9.21 | 23.53 |
| Zm00001d024468_P003 | Maize | nucleus | 13.18 | 21.72 |
| Zm00001d018050_P003 | Maize | nucleus | 15.69 | 19.43 |
| Zm00001d010987_P001 | Maize | nucleus | 15.06 | 18.65 |
| Zm00001d034629_P001 | Maize | nucleus | 15.9 | 17.55 |
| Zm00001d026448_P001 | Maize | nucleus | 14.85 | 17.19 |
| Zm00001d035512_P001 | Maize | nucleus | 17.78 | 16.63 |
| Zm00001d046621_P001 | Maize | nucleus | 12.55 | 15.27 |
| Zm00001d002075_P001 | Maize | nucleus | 16.11 | 14.45 |
| Zm00001d019230_P002 | Maize | plastid | 15.9 | 14.21 |
| Zm00001d038087_P003 | Maize | mitochondrion | 11.72 | 11.59 |
Protein Annotations
| EnsemblPlants:Zm00001d013170_P001 | EnsemblPlants:Zm00001d013170_T001 | EnsemblPlantsGene:Zm00001d013170 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:AP2-like_transcript_factor | ncoils:Coil | PANTHER:PTHR32467 | PANTHER:PTHR32467:SF47 | ProteinID:AQK62591.1 | SEG:seg |
| UniParc:UPI0008423CEC | UniProt:A0A1D6GGB3 | MapMan:35.1 | : | : | : |
Description
AP2 domain-containing transcription factor
Coordinates
chr5:-:5804406..5808177
Molecular Weight (calculated)
49846.4 Da
IEP (calculated)
9.348
GRAVY (calculated)
-0.355
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATMDGAAD GSSGVPVQQQ HHGGLFYPPV ISSSLAPFCY ALGGGQGGLA TSAADGGEEF YAGLSSMPLK SDGSLCIMEA LRRSEQERHG VAVSSVSPKL
101: EDFLGASAST AMALSLDSPS FYYGGAHGHG GYLQPLQCSM VPVSLGDDVY GGCHAQMVDE QSAAAMAASW FSARGGGGCY DVNGAGAIEP SQGHPHALDL
201: SMSSGTGSQS SSVTVKKRGG GGGGGGGGQK RPTVHRKSID TFGQRTSQYR GVTRHRWTGR YEAHLWDNSC RKEGQTRKGR QVVGHMVQVE DYREQLEEMK
301: NMTRQEYVAH LRRKSSGFSR GASIYRGVTR YGAGRKAVAP PWRWCRPAAA WRTPAARSRR RCLPLSSGAD GSGSSTRTCC RSLLHDTVSV DTAGTGGSAS
401: AHVSNASSLA PSVSSSSREQ SPDRGGVSAS LAMLFAKPAV APRLACPLPL GSWVSPSSAA RPGVSIAHLP LFAAWTDA
101: EDFLGASAST AMALSLDSPS FYYGGAHGHG GYLQPLQCSM VPVSLGDDVY GGCHAQMVDE QSAAAMAASW FSARGGGGCY DVNGAGAIEP SQGHPHALDL
201: SMSSGTGSQS SSVTVKKRGG GGGGGGGGQK RPTVHRKSID TFGQRTSQYR GVTRHRWTGR YEAHLWDNSC RKEGQTRKGR QVVGHMVQVE DYREQLEEMK
301: NMTRQEYVAH LRRKSSGFSR GASIYRGVTR YGAGRKAVAP PWRWCRPAAA WRTPAARSRR RCLPLSSGAD GSGSSTRTCC RSLLHDTVSV DTAGTGGSAS
401: AHVSNASSLA PSVSSSSREQ SPDRGGVSAS LAMLFAKPAV APRLACPLPL GSWVSPSSAA RPGVSIAHLP LFAAWTDA
001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS
Arabidopsis Description
ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.