Factsheet for Zm00001d026448_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G514200.1	Wheat	nucleus	64.16	71.82
Os04t0649100-03	Rice	nucleus	77.72	69.78
OQU82446	Sorghum	endoplasmic reticulum, vacuole	65.62	68.43
Zm00001d002075_P001	Maize	nucleus	88.14	68.29
TraesCS2D01G515800.1	Wheat	nucleus	76.76	65.23
TraesCS2B01G542400.2	Wheat	nucleus	76.27	65.08
CDY71282	Canola	nucleus	27.6	48.93
CDY71179	Canola	nucleus	26.63	48.46
GSMUA_Achr8P18550_001	Banana	endoplasmic reticulum, nucleus	40.68	46.41
Solyc03g044300.2.1	Tomato	nucleus	45.04	46.38
CDX69282	Canola	nucleus	44.79	46.25
Bra011741.1-P	Field mustard	nucleus	47.7	45.5
CDY62228	Canola	nucleus	47.46	45.48
CDY29538	Canola	nucleus	47.46	45.37
Bra017809.1-P	Field mustard	nucleus	47.46	45.37
AT4G36920.1	Thale cress	nucleus	47.22	45.14
Solyc02g093150.2.1	Tomato	nucleus	46.73	43.27
VIT_07s0031g00220.t01	Wine grape	nucleus	50.12	40.83
PGSC0003DMT400010231	Potato	nucleus	50.61	40.74
Zm00001d010987_P001	Maize	nucleus	38.01	40.67
PGSC0003DMT400016585	Potato	nucleus	45.76	39.79
KRH28441	Soybean	nucleus	46.49	38.71
Zm00001d034629_P001	Maize	nucleus	40.19	38.34
PGSC0003DMT400065501	Potato	nucleus	45.52	37.23
Solyc02g064960.2.1	Tomato	nucleus	45.04	36.9
Zm00001d046621_P001	Maize	nucleus	33.17	34.86
Zm00001d035512_P001	Maize	nucleus	42.37	34.25
Zm00001d019230_P002	Maize	plastid	41.16	31.78
Zm00001d024468_P003	Maize	nucleus	18.4	26.21
Zm00001d037511_P001	Maize	nucleus	12.11	25.25
Zm00001d014670_P001	Maize	endoplasmic reticulum, golgi	10.41	22.99
Zm00001d018050_P003	Maize	nucleus	16.95	18.13
Zm00001d013170_P001	Maize	nucleus	17.19	14.85
Zm00001d038087_P003	Maize	mitochondrion	15.98	13.66

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1D6JG02	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:AQK46664.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF18	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0004DE7B95	EnsemblPlantsGene:Zm00001d026448	EnsemblPlants:Zm00001d026448_P001
EnsemblPlants:Zm00001d026448_T001	SEG:seg	:	:	:	:

Description

AP2-EREBP-transcription factor 212Floral homeotic protein APETALA 2

Coordinates

chr10:+:146059085..146062110

Molecular Weight (calculated)

43499.3 Da

IEP (calculated)

9.272

GRAVY (calculated)

-0.544

Length

413 amino acids

Sequence
(BLAST)

001: MWDLNDSPAA EAAPPSPSAD DSGASFSSAA ALVDIPDDDS AAAAVVTRQF FVLAPAATIG AAPGSSNARA GWLRRAAAPA GGPAAVQAAA GKKSRRGPRS
101: RSSQYRGVTF YRRTGRWESH IWAYDRAAIK FRGVEADINF SLEDYQDDMK QMCHLSKEEF VHVLRRQSTG FPRGSSKYRG VTLHKCGRWE ARMGQFLGKK
201: YVYLGLFDTE EEAARAYDRA AIKCNGKDAV TNFDPSIYAE EEVAPAAATG GAAGDEHNLD LSLGSSAGNK RGSLDGGGGG GGDDKSSDQR VPMAFDIDWQ
301: TAARRSTKAK LLSNGDPGTA AGGLSLAIGG GGGHWPPQLQ HQQQQQRLHG ARNNGGGTSW PPPPHPCPPP VPAAAATAAA ASSRFHPYVV TSTTQSPAGW
401: VQKNGFHSLA RPT

Best Arabidopsis Sequence Match ( AT4G36920.2 )
(BLAST)

001: MWDLNDAPHQ TQREEESEEF CYSSPSKRVG SFSNSSSSAV VIEDGSDDDE LNRVRPNNPL VTHQFFPEMD SNGGGVASGF PRAHWFGVKF CQSDLATGSS
101: AGKATNVAAA VVEPAQPLKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY DRAAIKFRGV EADINFNIDD YDDDLKQMTN
201: LTKEEFVHVL RRQSTGFPRG SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDTEVEAA RAYDKAAIKC NGKDAVTNFD PSIYDEELNA ESSGNPTTPQ
301: DHNLDLSLGN SANSKHKSQD MRLRMNQQQQ DSLHSNEVLG LGQTGMLNHT PNSNHQFPGS SNIGSGGGFS LFPAAENHRF DGRASTNQVL TNAAASSGFS
401: PHHHNQIFNS TSTPHQNWLQ TNGFQPPLMR PS

Arabidopsis Description

AP2Floral homeotic protein APETALA 2 [Source:UniProtKB/Swiss-Prot;Acc:P47927]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.