Factsheet for Bra011741.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71282	Canola	nucleus	53.58	99.57
CDY71179	Canola	nucleus	51.5	98.24
CDX69282	Canola	nucleus	89.84	97.25
Bra017809.1-P	Field mustard	nucleus	90.99	91.2
AT4G36920.1	Thale cress	nucleus	89.84	90.05
TraesCS2A01G514200.1	Wheat	nucleus	50.81	59.62
Solyc03g044300.2.1	Tomato	nucleus	53.58	57.86
Bra012139.1-P	Field mustard	nucleus	47.11	56.67
GSMUA_Achr8P18550_001	Banana	endoplasmic reticulum, nucleus	45.5	54.42
VIT_07s0031g00220.t01	Wine grape	nucleus	62.12	53.06
Solyc02g093150.2.1	Tomato	nucleus	53.58	52.02
KRH28441	Soybean	nucleus	58.89	51.41
PGSC0003DMT400016585	Potato	nucleus	55.43	50.53
PGSC0003DMT400010231	Potato	nucleus	59.58	50.29
Os04t0649100-03	Rice	nucleus	52.42	49.35
Solyc02g064960.2.1	Tomato	nucleus	56.58	48.61
PGSC0003DMT400065501	Potato	nucleus	55.66	47.72
Zm00001d026448_P001	Maize	nucleus	45.5	47.7
TraesCS2D01G515800.1	Wheat	nucleus	51.96	46.3
TraesCS2B01G542400.2	Wheat	nucleus	51.73	46.28
Bra011939.1-P	Field mustard	nucleus	46.42	44.27
Zm00001d002075_P001	Maize	nucleus	52.19	42.4
OQU82446	Sorghum	endoplasmic reticulum, vacuole	38.57	42.17
Bra000487.1-P	Field mustard	nucleus	39.26	40.77
Bra007123.1-P	Field mustard	nucleus	31.87	40.23
Bra002510.1-P	Field mustard	nucleus	36.26	34.73
Bra020262.1-P	Field mustard	nucleus	34.18	34.5
Bra004641.1-P	Field mustard	nucleus	21.25	22.22
Bra000237.1-P	Field mustard	nucleus	21.25	19.87

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra011741
EnsemblPlants:Bra011741.1	EnsemblPlants:Bra011741.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4D5I4	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF18	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI00025467DA	SEG:seg	:	:	:	:

Description

AT4G36920 (E=4e-204) AP2, FLO2, FL1 | AP2 (APETALA 2); transcription factor

Coordinates

chrA01:+:793728..795868

Molecular Weight (calculated)

47776.2 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.735

Length

433 amino acids

Sequence
(BLAST)

001: MWDLNDSPHQ TLVEEESEEL CYSSPGKRVG SFSNSSSSAV VIEDGSDDDE HNRVRPNNQL VTHQFFPQME TSVGDDGGGG PGSGFPRSHW FGVKFCQSDL
101: ATGSSAGKPA TVAPVVEPAQ PLKKSRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY LGGFDTAHAA ARAYDRAAIK FRGVEADINF TIEDYDDDLK
201: QMTNLTKEEF VHVLRRQSTG FPRGSSKYRG VTLHKCGRWE ARMGQFLGKK YVYLGLFDTE VEAARAYDKA AIKCNGKDAV TNFDPSIYDD ELNAESSGNP
301: IQQDHNLDLS LGNSVNSKQK GQDMRLKMNQ QDSLHPNEIL GLGQTGMVNH IPNSNLQFPG SSNIGGGGGF SLFPVAENHR FDGRTTTNQV LANAAASSGF
401: SPHHHNQIFN STSTSHQNWL QTNGFQPSLM RPS

Best Arabidopsis Sequence Match ( AT4G36920.2 )
(BLAST)

001: MWDLNDAPHQ TQREEESEEF CYSSPSKRVG SFSNSSSSAV VIEDGSDDDE LNRVRPNNPL VTHQFFPEMD SNGGGVASGF PRAHWFGVKF CQSDLATGSS
101: AGKATNVAAA VVEPAQPLKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY DRAAIKFRGV EADINFNIDD YDDDLKQMTN
201: LTKEEFVHVL RRQSTGFPRG SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDTEVEAA RAYDKAAIKC NGKDAVTNFD PSIYDEELNA ESSGNPTTPQ
301: DHNLDLSLGN SANSKHKSQD MRLRMNQQQQ DSLHSNEVLG LGQTGMLNHT PNSNHQFPGS SNIGSGGGFS LFPAAENHRF DGRASTNQVL TNAAASSGFS
401: PHHHNQIFNS TSTPHQNWLQ TNGFQPPLMR PS

Arabidopsis Description

AP2Floral homeotic protein APETALA 2 [Source:UniProtKB/Swiss-Prot;Acc:P47927]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.