Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065501 | Potato | nucleus | 93.25 | 93.07 |
| Solyc03g044300.2.1 | Tomato | nucleus | 49.8 | 62.59 |
| Solyc02g093150.2.1 | Tomato | nucleus | 53.77 | 60.76 |
| CDX69282 | Canola | nucleus | 46.23 | 58.25 |
| AT4G36920.1 | Thale cress | nucleus | 48.61 | 56.71 |
| Bra011741.1-P | Field mustard | nucleus | 48.61 | 56.58 |
| TraesCS2A01G514200.1 | Wheat | nucleus | 40.87 | 55.83 |
| CDY29538 | Canola | nucleus | 47.82 | 55.79 |
| CDY62228 | Canola | nucleus | 47.62 | 55.68 |
| Bra017809.1-P | Field mustard | nucleus | 47.62 | 55.56 |
| CDY71179 | Canola | nucleus | 25.0 | 55.51 |
| CDY71282 | Canola | nucleus | 25.6 | 55.36 |
| GSMUA_Achr8P18550_001 | Banana | endoplasmic reticulum, nucleus | 38.69 | 53.87 |
| Os04t0649100-03 | Rice | nucleus | 43.85 | 48.04 |
| Zm00001d026448_P001 | Maize | nucleus | 36.9 | 45.04 |
| TraesCS2B01G542400.2 | Wheat | nucleus | 42.26 | 44.01 |
| TraesCS2D01G515800.1 | Wheat | nucleus | 42.26 | 43.83 |
| Solyc10g084340.1.1 | Tomato | nucleus | 39.68 | 43.29 |
| Solyc04g049800.2.1 | Tomato | nucleus | 33.73 | 42.71 |
| Solyc06g075510.2.1 | Tomato | nucleus | 39.68 | 42.19 |
| Solyc09g007260.2.1 | Tomato | nucleus | 37.1 | 41.1 |
| OQU82446 | Sorghum | endoplasmic reticulum, vacuole | 32.14 | 40.91 |
| Zm00001d002075_P001 | Maize | nucleus | 42.86 | 40.53 |
| Solyc11g072600.1.1 | Tomato | nucleus | 38.49 | 40.33 |
| Solyc02g030200.1.1 | Tomato | nucleus | 3.57 | 31.58 |
| Solyc02g030210.2.1 | Tomato | nucleus | 15.48 | 22.22 |
| Solyc03g123430.2.1 | Tomato | nucleus | 22.02 | 21.64 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ncoils:Coil |
| InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:K4B6T1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR32467 | PANTHER:PTHR32467:SF18 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:Solyc02g064960.2 | EnsemblPlants:Solyc02g064960.2.1 |
| UniParc:UPI0002768A0A | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2:+:36073711..36077281
Molecular Weight (calculated)
57302.1 Da
IEP (calculated)
8.513
GRAVY (calculated)
-1.018
Length
504 amino acids
Sequence
(BLAST)
(BLAST)
001: MWNLNNSPDH IKDYESEEGK GVGSISNSSS SAVEELYGSE EEDEFLEQNG LKGKKKKNIP SKIFGFSMIA PPNNNNHNDD NLSSESEPPV TRQFFPVDES
101: EIGSGNFNDR SCRFPRAHWA GVKFYQPEPS ANSPALLGKG SELSQQVQPM KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR
201: AYDRAAIKFR GMEADINFNL EDYEEDLKQM KNLTKEEFVH VLRRQSTGFP RGSSKYRGVT LHKCGRWEAR MGQLLGKKYV YLGLFDTENE AARAYDKAAI
301: KCNGKDAVTN FDPCIYENEL NSSECSNKAA DHSLDLSLGS SSSKQNSREM EDTNKNQNYP SIQFDVDWRH QGSKPKQPSP LDMEYGRRRN VYNETETLQL
401: FSQTHLHSPG SFKTNSNEMQ RFGQYMRAGD SQMIPPQFTS SNYQVQFPSS SNRRDTQQWQ SNTVPPPHLF ATAAASSGFP QQILRHQNWP HKSGFNYSLT
501: RPSN
101: EIGSGNFNDR SCRFPRAHWA GVKFYQPEPS ANSPALLGKG SELSQQVQPM KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR
201: AYDRAAIKFR GMEADINFNL EDYEEDLKQM KNLTKEEFVH VLRRQSTGFP RGSSKYRGVT LHKCGRWEAR MGQLLGKKYV YLGLFDTENE AARAYDKAAI
301: KCNGKDAVTN FDPCIYENEL NSSECSNKAA DHSLDLSLGS SSSKQNSREM EDTNKNQNYP SIQFDVDWRH QGSKPKQPSP LDMEYGRRRN VYNETETLQL
401: FSQTHLHSPG SFKTNSNEMQ RFGQYMRAGD SQMIPPQFTS SNYQVQFPSS SNRRDTQQWQ SNTVPPPHLF ATAAASSGFP QQILRHQNWP HKSGFNYSLT
501: RPSN
001: MWDLNDAPHQ TQREEESEEF CYSSPSKRVG SFSNSSSSAV VIEDGSDDDE LNRVRPNNPL VTHQFFPEMD SNGGGVASGF PRAHWFGVKF CQSDLATGSS
101: AGKATNVAAA VVEPAQPLKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY DRAAIKFRGV EADINFNIDD YDDDLKQMTN
201: LTKEEFVHVL RRQSTGFPRG SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDTEVEAA RAYDKAAIKC NGKDAVTNFD PSIYDEELNA ESSGNPTTPQ
301: DHNLDLSLGN SANSKHKSQD MRLRMNQQQQ DSLHSNEVLG LGQTGMLNHT PNSNHQFPGS SNIGSGGGFS LFPAAENHRF DGRASTNQVL TNAAASSGFS
401: PHHHNQIFNS TSTPHQNWLQ TNGFQPPLMR PS
101: AGKATNVAAA VVEPAQPLKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY DRAAIKFRGV EADINFNIDD YDDDLKQMTN
201: LTKEEFVHVL RRQSTGFPRG SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDTEVEAA RAYDKAAIKC NGKDAVTNFD PSIYDEELNA ESSGNPTTPQ
301: DHNLDLSLGN SANSKHKSQD MRLRMNQQQQ DSLHSNEVLG LGQTGMLNHT PNSNHQFPGS SNIGSGGGFS LFPAAENHRF DGRASTNQVL TNAAASSGFS
401: PHHHNQIFNS TSTPHQNWLQ TNGFQPPLMR PS
Arabidopsis Description
AP2Floral homeotic protein APETALA 2 [Source:UniProtKB/Swiss-Prot;Acc:P47927]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.