Factsheet for TraesCS2A01G514200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G515800.1	Wheat	nucleus	96.75	73.46
TraesCS2B01G542400.2	Wheat	nucleus	94.85	72.31
Os04t0649100-03	Rice	nucleus	83.2	66.74
Zm00001d026448_P001	Maize	nucleus	71.82	64.16
Zm00001d002075_P001	Maize	nucleus	79.67	55.16
CDX69282	Canola	nucleus	56.1	51.75
Solyc03g044300.2.1	Tomato	nucleus	55.56	51.12
GSMUA_Achr8P18550_001	Banana	endoplasmic reticulum, nucleus	50.14	51.1
OQU82446	Sorghum	endoplasmic reticulum, vacuole	54.74	51.01
Bra011741.1-P	Field mustard	nucleus	59.62	50.81
AT4G36920.1	Thale cress	nucleus	58.81	50.23
Bra017809.1-P	Field mustard	nucleus	58.54	50.0
CDY29538	Canola	nucleus	58.54	50.0
CDY62228	Canola	nucleus	58.27	49.88
CDY71282	Canola	nucleus	31.44	49.79
CDY71179	Canola	nucleus	30.35	49.34
Solyc02g093150.2.1	Tomato	nucleus	54.2	44.84
VIT_07s0031g00220.t01	Wine grape	nucleus	61.25	44.58
PGSC0003DMT400016585	Potato	nucleus	56.1	43.58
PGSC0003DMT400010231	Potato	nucleus	58.81	42.3
TraesCS5A01G473800.1	Wheat	nucleus	49.59	40.94
KRH28441	Soybean	nucleus	55.01	40.93
Solyc02g064960.2.1	Tomato	nucleus	55.83	40.87
PGSC0003DMT400065501	Potato	nucleus	55.56	40.59
TraesCS1A01G058400.1	Wheat	nucleus	49.32	35.69
TraesCS6A01G306300.2	Wheat	nucleus	26.83	26.4
TraesCS1A01G242800.1	Wheat	nucleus	25.2	22.25
TraesCS7A01G292900.1	Wheat	plastid	23.31	22.22

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0010073	GO:GO:0010093
GO:GO:0048316	GO:GO:0048481	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PFscan:PS51032
PANTHER:PTHR32467	PANTHER:PTHR32467:SF18	SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS2A01G514200	EnsemblPlants:TraesCS2A01G514200.1
TIGR:cd00018	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:738436440..738439082

Molecular Weight (calculated)

38631.5 Da

IEP (calculated)

6.723

GRAVY (calculated)

-0.423

Length

369 amino acids

Sequence
(BLAST)

001: MWDLNDSPAA EAPPLSPSVD DSGASSSSAA AVVEIPDDAD DDSAEAVVTR QFFPPAAPGE AAAGNGRAAW LRLAGAPAPA VAAAAAGAGA AGGPAAAAAA
101: KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GMEADINFSL EDYDDIKQMG NLTKEEFVHV LRRQSTGFPR
201: GSSKYRGVTL HKCGRWEARM GQFLGKKYVY LGLFDTEEEA ARSYDRAAIK CNGKDAVTNF DPSTYAEEFE PAASTGDAEQ NLDLSLGSSG GFMGSADPGT
301: AGGLSLTVGA GAGGLAGHWP PHHQYQPPPN NAAAAAAAAA ASSRFPPYIA AQAQSWLQKN GFHSLARPT

Best Arabidopsis Sequence Match ( AT4G36920.2 )
(BLAST)

001: MWDLNDAPHQ TQREEESEEF CYSSPSKRVG SFSNSSSSAV VIEDGSDDDE LNRVRPNNPL VTHQFFPEMD SNGGGVASGF PRAHWFGVKF CQSDLATGSS
101: AGKATNVAAA VVEPAQPLKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY DRAAIKFRGV EADINFNIDD YDDDLKQMTN
201: LTKEEFVHVL RRQSTGFPRG SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDTEVEAA RAYDKAAIKC NGKDAVTNFD PSIYDEELNA ESSGNPTTPQ
301: DHNLDLSLGN SANSKHKSQD MRLRMNQQQQ DSLHSNEVLG LGQTGMLNHT PNSNHQFPGS SNIGSGGGFS LFPAAENHRF DGRASTNQVL TNAAASSGFS
401: PHHHNQIFNS TSTPHQNWLQ TNGFQPPLMR PS

Arabidopsis Description

AP2Floral homeotic protein APETALA 2 [Source:UniProtKB/Swiss-Prot;Acc:P47927]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.