Factsheet for Zm00001d002075_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026448_P001	Maize	nucleus	68.29	88.14
OQU82446	Sorghum	endoplasmic reticulum, vacuole	61.35	82.58
Os04t0649100-03	Rice	nucleus	69.04	80.0
TraesCS2A01G514200.1	Wheat	nucleus	55.16	79.67
TraesCS2D01G515800.1	Wheat	nucleus	68.11	74.69
TraesCS2B01G542400.2	Wheat	nucleus	67.17	73.97
CDX69282	Canola	nucleus	40.15	53.5
Solyc03g044300.2.1	Tomato	nucleus	39.59	52.62
CDY71282	Canola	nucleus	22.89	52.36
CDY62228	Canola	nucleus	42.21	52.2
Bra011741.1-P	Field mustard	nucleus	42.4	52.19
CDY29538	Canola	nucleus	42.21	52.08
Bra017809.1-P	Field mustard	nucleus	42.21	52.08
CDY71179	Canola	nucleus	22.14	51.98
GSMUA_Achr8P18550_001	Banana	endoplasmic reticulum, nucleus	35.27	51.93
AT4G36920.1	Thale cress	nucleus	42.03	51.85
Solyc02g093150.2.1	Tomato	nucleus	41.46	49.55
VIT_07s0031g00220.t01	Wine grape	nucleus	45.97	48.32
PGSC0003DMT400010231	Potato	nucleus	44.47	46.2
PGSC0003DMT400016585	Potato	nucleus	40.71	45.68
Zm00001d010987_P001	Maize	nucleus	32.65	45.08
KRH28441	Soybean	nucleus	41.09	44.15
Zm00001d034629_P001	Maize	nucleus	35.65	43.88
PGSC0003DMT400065501	Potato	nucleus	40.71	42.97
Solyc02g064960.2.1	Tomato	nucleus	40.53	42.86
Zm00001d046621_P001	Maize	nucleus	30.21	40.97
Zm00001d035512_P001	Maize	nucleus	38.65	40.31
Zm00001d019230_P002	Maize	plastid	36.02	35.89
Zm00001d037511_P001	Maize	nucleus	10.88	29.29
Zm00001d024468_P003	Maize	nucleus	15.76	28.97
Zm00001d014670_P001	Maize	endoplasmic reticulum, golgi	8.44	24.06
Zm00001d018050_P003	Maize	nucleus	15.01	20.73
Zm00001d013170_P001	Maize	nucleus	14.45	16.11
Zm00001d038087_P003	Maize	mitochondrion	13.7	15.11

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1D6DW49	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	ProteinID:ONM12938.1	PFAM:PF00847	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF18	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0008458A96	EnsemblPlantsGene:Zm00001d002075	EnsemblPlants:Zm00001d002075_P001
EnsemblPlants:Zm00001d002075_T001	SEG:seg	:	:	:	:

Description

AP2-EREBP-transcription factor 197Floral homeotic protein APETALA 2

Coordinates

chr2:-:5456239..5459958

Molecular Weight (calculated)

56056.1 Da

IEP (calculated)

8.756

GRAVY (calculated)

-0.540

Length

533 amino acids

Sequence
(BLAST)

001: MWDLNDSPAA EAAPPSPSAD DSGASSSSAA ALVEIPDDAD DDSAAAAAEA VVTRQFFPAP AAVGAAPGPG SSSARAGWLR LAAAAPPPAA GGSNGVAQTG
101: GPAAAAAAAG KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GVEADINFSL EDYQDDMKQQ MGHLSKEEFV
201: HVLRRQSTGF PRGSSKYRGV TLHKCGRWEA RMGQFLGKKY VYLGLFDTEE EAARAYDRAA IKCNGKDAVT NFDPSIYAEE LEPAASTGGG GDDHNHNLDL
301: SLGSSAGNKR GSLDDGGGGG GGGDDETSDQ RVPMAFDVDW QTAAPRSTKA KVPVRFGLAF RINEACLVKC CLIKQALSRF NHRVRWPAQL DASSKQPQTQ
401: MLPPPPPAVL RVAHQLPLPF GPRHPQSQFL SNGGDPGTSG GLSLAIGGAG GGHWPPQLQH LQQQRLHGAW ANGGGTSWPP PPHPHPHPHP PPPSTAATAA
501: AASSRFPPYV VTTTQGPAGW AQKNGFHSLA RPT

Best Arabidopsis Sequence Match ( AT4G36920.2 )
(BLAST)

001: MWDLNDAPHQ TQREEESEEF CYSSPSKRVG SFSNSSSSAV VIEDGSDDDE LNRVRPNNPL VTHQFFPEMD SNGGGVASGF PRAHWFGVKF CQSDLATGSS
101: AGKATNVAAA VVEPAQPLKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY DRAAIKFRGV EADINFNIDD YDDDLKQMTN
201: LTKEEFVHVL RRQSTGFPRG SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDTEVEAA RAYDKAAIKC NGKDAVTNFD PSIYDEELNA ESSGNPTTPQ
301: DHNLDLSLGN SANSKHKSQD MRLRMNQQQQ DSLHSNEVLG LGQTGMLNHT PNSNHQFPGS SNIGSGGGFS LFPAAENHRF DGRASTNQVL TNAAASSGFS
401: PHHHNQIFNS TSTPHQNWLQ TNGFQPPLMR PS

Arabidopsis Description

AP2Floral homeotic protein APETALA 2 [Source:UniProtKB/Swiss-Prot;Acc:P47927]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.