Factsheet for Zm00001d019230_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96101	Sorghum	plastid	88.6	87.94
Os07t0235800-01	Rice	nucleus	62.43	76.61
Zm00001d034629_P001	Maize	nucleus	50.84	62.82
Zm00001d010987_P001	Maize	nucleus	32.52	45.08
Zm00001d026448_P001	Maize	nucleus	31.78	41.16
Zm00001d046621_P001	Maize	nucleus	28.41	38.68
Zm00001d035512_P001	Maize	nucleus	36.26	37.96
Zm00001d002075_P001	Maize	nucleus	35.89	36.02
Zm00001d037511_P001	Maize	nucleus	10.84	29.29
Zm00001d024468_P003	Maize	nucleus	14.95	27.59
Zm00001d014670_P001	Maize	endoplasmic reticulum, golgi	8.41	24.06
Zm00001d018050_P003	Maize	nucleus	13.64	18.91
Zm00001d038087_P003	Maize	mitochondrion	14.95	16.56
Zm00001d013170_P001	Maize	nucleus	14.21	15.9

Protein Annotations

EntrezGene:100271892	MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
EMBL:BT063357	UniProt:C0P4Y8	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	ProteinID:ONM52513.1	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF36	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI0001948CD0	EnsemblPlantsGene:Zm00001d019230	EnsemblPlants:Zm00001d019230_P002	EnsemblPlants:Zm00001d019230_T002	SEG:seg	:

Description

sister of indeterminate spikelet1 sister of indeterminate spikelet1

Coordinates

chr7:+:23054461..23065589

Molecular Weight (calculated)

57114.9 Da

IEP (calculated)

8.636

GRAVY (calculated)

-0.452

Length

535 amino acids

Sequence
(BLAST)

001: MASPAIPFAP LTSHRAAPFV LGCPPPWPPP PPPAARPRPP PPRPDAAAAA RLLEEEAGAG SSRARSPGGP ELESMVLDLN AESPTPGSAS AASSSSVVVG
101: GGFFRFDLLG GTPDEEGCSP SPPIVTRQLF PLPYPDAAGS TAASTASNGS PPPEVAGAWA RRPADLGAPA LAQGKVMSAP SSPAVLSPAA GKKSRRGPRS
201: RSSQYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA RAYDRAAIKF RGLDADINFQ LKDYEDDLKQ MRNWTKEEFV HILRRQSTGF ARGSSKYRGV
301: TLHKCGRWEA RMGQLLGKKY IYLGLFDSEI EAARAYDRAA IRFNGPDAVR NFDSVSYDGD VPLPPAIEKD AVVDGDILDL NLRISQPNVH DLRSDGTLTG
401: FGLSCNSPEA SSSIVSQPMG PQWPVHPHSR SMRPQHPHLY ASPCPGFFVN LREAPMQEEE NRSEPACPQP FPSWAWQTQG SRAPVLPATT AASSGFSTAA
501: ATGVDAATAG HSVPPPSGSL RQFSGYHQLR FPPTA

Best Arabidopsis Sequence Match ( AT2G28550.3 )
(BLAST)

001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP

Arabidopsis Description

RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.