Factsheet for Zm00001d018050_P003

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30761	Sorghum	nucleus	75.13	79.45
TraesCS6A01G306300.2	Wheat	nucleus	55.18	56.8
HORVU6Hr1G075640.13	Barley	nucleus	54.66	56.42
TraesCS6B01G334700.1	Wheat	nucleus	54.66	56.27
TraesCS6D01G285400.2	Wheat	nucleus	54.66	56.27
Os02t0747600-01	Rice	nucleus	48.19	55.03
GSMUA_Achr7P16540_001	Banana	mitochondrion	30.05	42.18
Zm00001d037511_P001	Maize	nucleus	20.47	39.9
Zm00001d024468_P003	Maize	nucleus	29.79	39.66
Zm00001d014670_P001	Maize	endoplasmic reticulum, golgi	15.03	31.02
Zm00001d010987_P001	Maize	nucleus	18.65	18.65
Zm00001d034629_P001	Maize	nucleus	20.73	18.48
Zm00001d046621_P001	Maize	nucleus	18.13	17.81
Zm00001d026448_P001	Maize	nucleus	18.13	16.95
Zm00001d013170_P001	Maize	nucleus	19.43	15.69
Zm00001d035512_P001	Maize	nucleus	20.73	15.66
Zm00001d002075_P001	Maize	nucleus	20.73	15.01
Zm00001d019230_P002	Maize	plastid	18.91	13.64
Zm00001d038087_P003	Maize	mitochondrion	12.69	10.14

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1D6HKG8	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:AQK74927.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF47	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0008456CFF	EnsemblPlantsGene:Zm00001d018050	EnsemblPlants:Zm00001d018050_P003
EnsemblPlants:Zm00001d018050_T003	SEG:seg	:	:	:	:

Description

AP2-EREBP-transcription factor 187AP2-like ethylene-responsive transcription factor AIL1

Coordinates

chr5:-:213161651..213165860

Molecular Weight (calculated)

42700.1 Da

IEP (calculated)

7.002

GRAVY (calculated)

-0.636

Length

386 amino acids

Sequence
(BLAST)

001: MEESDLGGNL GKQTEEDKAA GESGDEGKIE RSQSINLNRV PAVAVEAMST QGNCETHGAA VPGTKDAGTG KAGQSSGDRQ EEKLPKCEQV DYGSEVEGCA
101: DDENPGKRAA LVTLVGNEYC GDEDERVQVL TIVKKDEHAD DIVDRINPGT VAGYSEVKGA VGASAATSAV RPAGSRSSSF HGVTRHRWSG KYEAHLWDSS
201: CRVEGRRRKG KQGSYDTEEK AARAYDVAAI KYWGENTRLN FPASSFPLAS VISISYMMAL YMSELLQISQ YGKELEDIRD LSREECVTYL RRRSSCFSRG
301: ASIYRGVTRR QKDGRWQARI GLVAGTRDIY LGTFSMQNMN FDLPMPLKSN WFEFTDDLNF VPSQKQRKKL QRLMILLPLR YVAKTL

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.