Factsheet for Zm00001d046621_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76762	Sorghum	nucleus	80.15	66.74
TraesCS7B01G440400.1	Wheat	nucleus	52.42	50.86
Os06t0639200-01	Rice	nucleus	42.75	50.3
TraesCS7D01G512600.1	Wheat	nucleus	53.69	48.62
Zm00001d010987_P001	Maize	nucleus	36.9	37.56
HORVU7Hr1G116220.4	Barley	nucleus	52.42	34.8
Zm00001d034629_P001	Maize	nucleus	37.91	34.41
Zm00001d026448_P001	Maize	nucleus	34.86	33.17
Zm00001d002075_P001	Maize	nucleus	40.97	30.21
Zm00001d035512_P001	Maize	nucleus	39.19	30.14
Zm00001d024468_P003	Maize	nucleus	21.37	28.97
Zm00001d019230_P002	Maize	plastid	38.68	28.41
Zm00001d037511_P001	Maize	nucleus	13.99	27.78
Solyc02g030200.1.1	Tomato	nucleus	3.82	26.32
Zm00001d014670_P001	Maize	endoplasmic reticulum, golgi	10.69	22.46
Zm00001d018050_P003	Maize	nucleus	17.81	18.13
Zm00001d013170_P001	Maize	nucleus	15.27	12.55
Zm00001d038087_P003	Maize	mitochondrion	12.98	10.56
CDY19560	Canola	nucleus	1.27	4.85

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	EntrezGene:732805	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:AQL04723.1	UniProt:B4FTA8	EMBL:BT040346	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EMBL:KJ726941
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF9	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI00017B8376	EnsemblPlantsGene:Zm00001d046621	EnsemblPlants:Zm00001d046621_P001	EnsemblPlants:Zm00001d046621_T001	SEG:seg

Description

glossy15Floral homeotic protein APETALA 2

Coordinates

chr9:+:99138564..99141663

Molecular Weight (calculated)

43354.6 Da

IEP (calculated)

8.863

GRAVY (calculated)

-0.682

Length

393 amino acids

Sequence
(BLAST)

001: MAATRRAFFH SAVDGIARAG PGEAELLPAP PQVGRPVEGA SSMVFGFPVP RPTMPDSRPA AVTQQFFPPT TTAAQQATME EQCHVPAGSA AEQWVRSSAS
101: RKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAQAAAR AYDQAAIKFR GLNADINFTL DDYKDEMKKM KDLSKEEFVL VLRRQGAGFV
201: RGSSRFRGVT QHKCGKWEAR IGQLMGKKYV YLGLYDTETE AAQAYDKAAI KCYGKEAVTN FDAQSYDKEL QSQPWDGELD LELGLGCASS DPSTVAVEAF
301: SPATSSSSRK QRTMTLTLGL PEEEEETGAG YPHSSSSRRP PAPAAGMFGR PADDHVHVAP PSHRQWQQQG RHAAPDGTPL DRSYHHWSIR FDP

Best Arabidopsis Sequence Match ( AT2G28550.3 )
(BLAST)

001: MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR
101: DVEGSSSSRN WIDLSFDRIG DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR
201: GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE AARAYDKAAI NTNGREAVTN
301: FEMSSYQNEI NSESNNSEID LNLGISLSTG NAPKQNGRLF HFPSNTYETQ RGVSLRIDNE YMGKPVNTPL PYGSSDHRLY WNGACPSYNN PAEGRATEKR
401: SEAEGMMSNW GWQRPGQTSA VRPQPPGPQP PPLFSVAAAS SGFSHFRPQP PNDNATRGYF YPHP

Arabidopsis Description

RAP2.7Related to AP2.7 [Source:UniProtKB/TrEMBL;Acc:F4IIR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.